Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C27F2.9 | F53A9.7 | C27F2.9.1 | F53A9.7.1 | JmjC domain-containing protein. | Uncharacterized protein. | 0.811 |
C27F2.9 | T09B9.4 | C27F2.9.1 | T09B9.4.1 | JmjC domain-containing protein. | Uncharacterized protein T09B9.4. | 0.811 |
C27F2.9 | W07E11.1 | C27F2.9.1 | W07E11.1b.1 | JmjC domain-containing protein. | Glutamine amidotransferase type-2 domain-containing protein. | 0.539 |
C27F2.9 | ifd-1 | C27F2.9.1 | R04E5.10a.1 | JmjC domain-containing protein. | Intermediate filament protein ifd-1; Cytoplasmic intermediate filaments provide mechanical strength to cells. Not essential protein. | 0.410 |
C27F2.9 | paa-1 | C27F2.9.1 | F48E8.5.2 | JmjC domain-containing protein. | Probable serine/threonine-protein phosphatase PP2A regulatory subunit; Acts as a scaffolding protein for phosphatase let-92 and its regulatory subunits (Probable). Probably together with let-92 and regulatory subunit sur-6, regulates centriole duplication, microtubule outgrowth and mitotic spindle stability during early embryonic cell division by preventing the degradation of sas-5 and kinase zyg-1. During vulva development, may play a role with phosphatase let-92 and regulatory subunit sur-6 in the induction of vulva cell precursors by positively regulating let-60/Ras- MAP kinase sign [...] | 0.699 |
F53A9.7 | C27F2.9 | F53A9.7.1 | C27F2.9.1 | Uncharacterized protein. | JmjC domain-containing protein. | 0.811 |
F53A9.7 | T09B9.4 | F53A9.7.1 | T09B9.4.1 | Uncharacterized protein. | Uncharacterized protein T09B9.4. | 0.964 |
F53A9.7 | W07E11.1 | F53A9.7.1 | W07E11.1b.1 | Uncharacterized protein. | Glutamine amidotransferase type-2 domain-containing protein. | 0.850 |
F53A9.7 | ifd-1 | F53A9.7.1 | R04E5.10a.1 | Uncharacterized protein. | Intermediate filament protein ifd-1; Cytoplasmic intermediate filaments provide mechanical strength to cells. Not essential protein. | 0.809 |
F53A9.7 | sma-9 | F53A9.7.1 | T05A10.1m.1 | Uncharacterized protein. | SMAll. | 0.665 |
T09B9.4 | C27F2.9 | T09B9.4.1 | C27F2.9.1 | Uncharacterized protein T09B9.4. | JmjC domain-containing protein. | 0.811 |
T09B9.4 | F53A9.7 | T09B9.4.1 | F53A9.7.1 | Uncharacterized protein T09B9.4. | Uncharacterized protein. | 0.964 |
T09B9.4 | W07E11.1 | T09B9.4.1 | W07E11.1b.1 | Uncharacterized protein T09B9.4. | Glutamine amidotransferase type-2 domain-containing protein. | 0.851 |
T09B9.4 | W07G4.5 | T09B9.4.1 | W07G4.5.1 | Uncharacterized protein T09B9.4. | Uncharacterized protein. | 0.529 |
T09B9.4 | ifd-1 | T09B9.4.1 | R04E5.10a.1 | Uncharacterized protein T09B9.4. | Intermediate filament protein ifd-1; Cytoplasmic intermediate filaments provide mechanical strength to cells. Not essential protein. | 0.808 |
T09B9.4 | paa-1 | T09B9.4.1 | F48E8.5.2 | Uncharacterized protein T09B9.4. | Probable serine/threonine-protein phosphatase PP2A regulatory subunit; Acts as a scaffolding protein for phosphatase let-92 and its regulatory subunits (Probable). Probably together with let-92 and regulatory subunit sur-6, regulates centriole duplication, microtubule outgrowth and mitotic spindle stability during early embryonic cell division by preventing the degradation of sas-5 and kinase zyg-1. During vulva development, may play a role with phosphatase let-92 and regulatory subunit sur-6 in the induction of vulva cell precursors by positively regulating let-60/Ras- MAP kinase sign [...] | 0.711 |
T09B9.4 | ppfr-1 | T09B9.4.1 | F16A11.3d.1 | Uncharacterized protein T09B9.4. | Serine/threonine-protein phosphatase 4 regulatory subunit 1; Probable regulatory subunit of serine/threonine-protein phosphatase PP4 which may play a role in meiosis and embryonic mitosis. Probably in association with catalytic subunit pph-4.1, regulates microtubule severing during oocyte meiosis II by dephosphorylating and likely activating mei-1, a component of the katanin microtubule severing complex. | 0.533 |
T09B9.4 | pph-4.1 | T09B9.4.1 | Y75B8A.30.1 | Uncharacterized protein T09B9.4. | Serine/threonine-protein phosphatase 4 catalytic subunit 1; Protein phosphatase which plays an essential role in meiosis and in early embryonic mitosis. During spermatocyte meiosis and the first embryonic mitosis, regulates centrosome maturation, and thus spindle formation, by recruiting some of the components of the pericentriolar material (PCM). During oocyte meiosis I, regulates meiotic chromosome dynamics including synapsis-independent chromosome pairing, restriction of synapsis to homologous chromosomes, programmed DNA double-strand break initiation and crossover formation resulti [...] | 0.539 |
T09B9.4 | pph-4.2 | T09B9.4.1 | Y49E10.3a.1 | Uncharacterized protein T09B9.4. | Serine/threonine-protein phosphatase 4 catalytic subunit 2; Protein phosphatase which seems to be involved in larval development but not essential for embryogenesis. | 0.544 |
T09B9.4 | sma-9 | T09B9.4.1 | T05A10.1m.1 | Uncharacterized protein T09B9.4. | SMAll. | 0.689 |
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