Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B0024.4 | C23G10.1 | B0024.4.1 | C23G10.1b.1 | Uncharacterized protein. | Putative serine/threonine-protein phosphatase C23G10.1. | 0.850 |
B0024.4 | col-41 | B0024.4.1 | T10B10.1.1 | Uncharacterized protein. | Col_cuticle_N domain-containing protein. | 0.693 |
B0024.4 | fmo-2 | B0024.4.1 | K08C7.5.1 | Uncharacterized protein. | Dimethylaniline monooxygenase [N-oxide-forming]. | 0.582 |
B0024.4 | ttr-21 | B0024.4.1 | F09F3.6.1 | Uncharacterized protein. | TransThyretin-Related family domain. | 0.705 |
C23G10.1 | B0024.4 | C23G10.1b.1 | B0024.4.1 | Putative serine/threonine-protein phosphatase C23G10.1. | Uncharacterized protein. | 0.850 |
C23G10.1 | col-41 | C23G10.1b.1 | T10B10.1.1 | Putative serine/threonine-protein phosphatase C23G10.1. | Col_cuticle_N domain-containing protein. | 0.861 |
C23G10.1 | fmo-2 | C23G10.1b.1 | K08C7.5.1 | Putative serine/threonine-protein phosphatase C23G10.1. | Dimethylaniline monooxygenase [N-oxide-forming]. | 0.809 |
C23G10.1 | ttr-21 | C23G10.1b.1 | F09F3.6.1 | Putative serine/threonine-protein phosphatase C23G10.1. | TransThyretin-Related family domain. | 0.807 |
col-17 | col-41 | F11G11.10.2 | T10B10.1.1 | COLlagen. | Col_cuticle_N domain-containing protein. | 0.693 |
col-17 | dpy-8 | F11G11.10.2 | C31H2.2.1 | COLlagen. | Col_cuticle_N domain-containing protein. | 0.647 |
col-17 | rol-8 | F11G11.10.2 | ZK1290.3a.1 | COLlagen. | Cuticle collagen 6; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.868 |
col-41 | B0024.4 | T10B10.1.1 | B0024.4.1 | Col_cuticle_N domain-containing protein. | Uncharacterized protein. | 0.693 |
col-41 | C23G10.1 | T10B10.1.1 | C23G10.1b.1 | Col_cuticle_N domain-containing protein. | Putative serine/threonine-protein phosphatase C23G10.1. | 0.861 |
col-41 | col-17 | T10B10.1.1 | F11G11.10.2 | Col_cuticle_N domain-containing protein. | COLlagen. | 0.693 |
col-41 | col-42 | T10B10.1.1 | Y69H2.14.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.759 |
col-41 | col-44 | T10B10.1.1 | F54B11.2.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.699 |
col-41 | dpy-8 | T10B10.1.1 | C31H2.2.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.665 |
col-41 | fmo-2 | T10B10.1.1 | K08C7.5.1 | Col_cuticle_N domain-containing protein. | Dimethylaniline monooxygenase [N-oxide-forming]. | 0.701 |
col-41 | rol-8 | T10B10.1.1 | ZK1290.3a.1 | Col_cuticle_N domain-containing protein. | Cuticle collagen 6; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.676 |
col-41 | seb-2 | T10B10.1.1 | ZK643.3b.1 | Col_cuticle_N domain-containing protein. | G-protein coupled receptor seb-2; Not known. Putative receptor. | 0.741 |
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