STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nas-20Zinc metalloproteinase nas-20; Metalloprotease. (379 aa)    
Predicted Functional Partners:
Y45F10C.4
UPF0375 protein Y45F10C.4.
   
    0.592
C35B1.4
Uncharacterized protein.
   
    0.542
Y62H9A.4
Uncharacterized protein.
   
    0.537
F17E9.4
Uncharacterized protein.
   
    0.512
nas-3
Zinc metalloproteinase nas-3; Metalloprotease.
  
     0.477
nas-2
Zinc metalloproteinase nas-2; Metalloprotease.
  
     0.468
Y19D10A.6
Metalloendopeptidase.
  
     0.468
clec-97
C-type lectin domain-containing protein.
   
    0.461
pes-23
MFS domain-containing protein.
   
    0.460
Y57G11B.5
Uncharacterized protein.
   
    0.457
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.