Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| F08B4.7 | sup-12 | F08B4.7.1 | T22B2.4a.1 | U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. | RRM domain-containing protein. | 0.705 |
| R02F2.5 | egl-15 | R02F2.5.1 | F58A3.2c.1 | Uncharacterized protein. | Myoblast growth factor receptor egl-15; Receptor tyrosine kinase required for larval development. May phosphorylate adapter protein soc-1 which in turn may result in the recruitment and/or activation of phosphatase ptp-2. May activate the Ras/MAPK kinase signaling pathway which includes sem-5, sos-1, let-60/Ras, lin-45/Raf, mek-2 and mpk-1. Acts in the hypodermis to regulate axon growth and fluid homeostasis. Activates protein degradation in muscles. Probably following interaction with ligand let-756, regulates negatively membrane protrusion from body wall muscles during larval develop [...] | 0.465 |
| R02F2.5 | mec-8 | R02F2.5.1 | F46A9.6.3 | Uncharacterized protein. | Mec-8 protein. | 0.665 |
| R02F2.5 | sup-12 | R02F2.5.1 | T22B2.4a.1 | Uncharacterized protein. | RRM domain-containing protein. | 0.699 |
| R02F2.5 | toe-4 | R02F2.5.1 | W02A11.3.1 | Uncharacterized protein. | RING-type domain-containing protein. | 0.911 |
| asd-1 | sup-12 | R74.5a.2 | T22B2.4a.1 | RRM domain-containing protein. | RRM domain-containing protein. | 0.980 |
| egl-15 | R02F2.5 | F58A3.2c.1 | R02F2.5.1 | Myoblast growth factor receptor egl-15; Receptor tyrosine kinase required for larval development. May phosphorylate adapter protein soc-1 which in turn may result in the recruitment and/or activation of phosphatase ptp-2. May activate the Ras/MAPK kinase signaling pathway which includes sem-5, sos-1, let-60/Ras, lin-45/Raf, mek-2 and mpk-1. Acts in the hypodermis to regulate axon growth and fluid homeostasis. Activates protein degradation in muscles. Probably following interaction with ligand let-756, regulates negatively membrane protrusion from body wall muscles during larval develop [...] | Uncharacterized protein. | 0.465 |
| egl-15 | sup-12 | F58A3.2c.1 | T22B2.4a.1 | Myoblast growth factor receptor egl-15; Receptor tyrosine kinase required for larval development. May phosphorylate adapter protein soc-1 which in turn may result in the recruitment and/or activation of phosphatase ptp-2. May activate the Ras/MAPK kinase signaling pathway which includes sem-5, sos-1, let-60/Ras, lin-45/Raf, mek-2 and mpk-1. Acts in the hypodermis to regulate axon growth and fluid homeostasis. Activates protein degradation in muscles. Probably following interaction with ligand let-756, regulates negatively membrane protrusion from body wall muscles during larval develop [...] | RRM domain-containing protein. | 0.903 |
| exc-7 | hrpf-1 | F35H8.5.1 | W02D3.11a.1 | Uncharacterized protein. | HnRNP F homolog. | 0.801 |
| exc-7 | mec-8 | F35H8.5.1 | F46A9.6.3 | Uncharacterized protein. | Mec-8 protein. | 0.812 |
| exc-7 | sup-12 | F35H8.5.1 | T22B2.4a.1 | Uncharacterized protein. | RRM domain-containing protein. | 0.875 |
| exc-7 | sym-2 | F35H8.5.1 | ZK1067.6a.1 | Uncharacterized protein. | RNA-binding protein sym-2; mRNA splicing factor that regulates alternative splicing of many genes in embryo. Probably plays a role in the formation of embryo- specific isoforms; Belongs to the ESRP family. | 0.818 |
| hrpf-1 | exc-7 | W02D3.11a.1 | F35H8.5.1 | HnRNP F homolog. | Uncharacterized protein. | 0.801 |
| hrpf-1 | mec-8 | W02D3.11a.1 | F46A9.6.3 | HnRNP F homolog. | Mec-8 protein. | 0.531 |
| hrpf-1 | sup-12 | W02D3.11a.1 | T22B2.4a.1 | HnRNP F homolog. | RRM domain-containing protein. | 0.708 |
| hrpf-1 | sym-2 | W02D3.11a.1 | ZK1067.6a.1 | HnRNP F homolog. | RNA-binding protein sym-2; mRNA splicing factor that regulates alternative splicing of many genes in embryo. Probably plays a role in the formation of embryo- specific isoforms; Belongs to the ESRP family. | 0.452 |
| mec-8 | R02F2.5 | F46A9.6.3 | R02F2.5.1 | Mec-8 protein. | Uncharacterized protein. | 0.665 |
| mec-8 | exc-7 | F46A9.6.3 | F35H8.5.1 | Mec-8 protein. | Uncharacterized protein. | 0.812 |
| mec-8 | hrpf-1 | F46A9.6.3 | W02D3.11a.1 | Mec-8 protein. | HnRNP F homolog. | 0.531 |
| mec-8 | sup-12 | F46A9.6.3 | T22B2.4a.1 | Mec-8 protein. | RRM domain-containing protein. | 0.855 |
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