Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
T24G10.2 | let-526 | T24G10.2.1 | C01G8.9c.1 | SWIB domain-containing protein. | ARID domain-containing protein. | 0.602 |
T24G10.2 | pbrm-1 | T24G10.2.1 | C26C6.1a.1 | SWIB domain-containing protein. | HMG box domain-containing protein. | 0.786 |
T24G10.2 | phf-10 | T24G10.2.1 | F33E11.6b.2 | SWIB domain-containing protein. | PHD-type domain-containing protein. | 0.665 |
T24G10.2 | snfc-5 | T24G10.2.1 | R07E5.3.1 | SWIB domain-containing protein. | SNF chromatin remodeling Complex component; Belongs to the SNF5 family. | 0.830 |
T24G10.2 | swsn-1 | T24G10.2.1 | Y113G7B.23c.1 | SWIB domain-containing protein. | SANT domain-containing protein. | 0.798 |
T24G10.2 | swsn-3 | T24G10.2.1 | Y71H2AM.17.1 | SWIB domain-containing protein. | HMG box domain-containing protein. | 0.748 |
T24G10.2 | swsn-7 | T24G10.2.1 | C08B11.3a.1 | SWIB domain-containing protein. | SWI/SNF nucleosome remodeling complex component. | 0.596 |
T24G10.2 | swsn-9 | T24G10.2.1 | C01H6.7a.3 | SWIB domain-containing protein. | Bromo domain-containing protein. | 0.615 |
T24G10.2 | tbp-1 | T24G10.2.1 | T20B12.2.1 | SWIB domain-containing protein. | TATA-box-binding protein; General transcription factor that functions at the core of the DNA-binding multiprotein factor TFIID. Binding of TFIID to the TATA box is the initial transcriptional step of the pre-initiation complex (PIC), playing a role in the activation of eukaryotic genes transcribed by RNA polymerase II. | 0.622 |
T24G10.2 | top-1 | T24G10.2.1 | M01E5.5a.2 | SWIB domain-containing protein. | DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)- enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then rotates around the intact phosphodiester bond on the opposing strand, thus remo [...] | 0.867 |
let-526 | T24G10.2 | C01G8.9c.1 | T24G10.2.1 | ARID domain-containing protein. | SWIB domain-containing protein. | 0.602 |
let-526 | pbrm-1 | C01G8.9c.1 | C26C6.1a.1 | ARID domain-containing protein. | HMG box domain-containing protein. | 0.975 |
let-526 | phf-10 | C01G8.9c.1 | F33E11.6b.2 | ARID domain-containing protein. | PHD-type domain-containing protein. | 0.618 |
let-526 | snfc-5 | C01G8.9c.1 | R07E5.3.1 | ARID domain-containing protein. | SNF chromatin remodeling Complex component; Belongs to the SNF5 family. | 0.990 |
let-526 | swsn-1 | C01G8.9c.1 | Y113G7B.23c.1 | ARID domain-containing protein. | SANT domain-containing protein. | 0.992 |
let-526 | swsn-3 | C01G8.9c.1 | Y71H2AM.17.1 | ARID domain-containing protein. | HMG box domain-containing protein. | 0.977 |
let-526 | swsn-7 | C01G8.9c.1 | C08B11.3a.1 | ARID domain-containing protein. | SWI/SNF nucleosome remodeling complex component. | 0.904 |
let-526 | swsn-9 | C01G8.9c.1 | C01H6.7a.3 | ARID domain-containing protein. | Bromo domain-containing protein. | 0.797 |
pbrm-1 | T24G10.2 | C26C6.1a.1 | T24G10.2.1 | HMG box domain-containing protein. | SWIB domain-containing protein. | 0.786 |
pbrm-1 | let-526 | C26C6.1a.1 | C01G8.9c.1 | HMG box domain-containing protein. | ARID domain-containing protein. | 0.975 |
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