STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsp-16.11Heat shock protein Hsp-16.1/Hsp-16.11. (145 aa)    
Predicted Functional Partners:
hsp-12.6
SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.
     
 0.988
hsp-16.48
Heat shock protein Hsp-16.48/Hsp-16.49; Belongs to the small heat shock protein (HSP20) family.
  
 
0.942
sip-1
Stress-induced protein 1; Belongs to the small heat shock protein (HSP20) family.
     
0.909
hsf-1
HSF_DOMAIN domain-containing protein.
    
 0.897
hsp-70
Heat Shock Protein; Belongs to the heat shock protein 70 family.
   
 
 0.890
F44E5.4
Uncharacterized protein; Belongs to the heat shock protein 70 family.
   
 
 0.862
hsp-1
Heat shock 70 kDa protein A.
   
 0.812
daf-16
Forkhead box protein O; Forkhead-type transcription factor. Binds to the promoters of genes that contain the daf-16 binding element (DBE), TTGTTTAC, in their regulatory region. Functions in the Insulin/IGF-1-like signaling (IIS) mediated pathway which affects lipogenesis, lifespan, starvation survival, heat shock and oxidative stress responses, and dauer formation. Longevity signaling predominantly arises from expression in the intestine. Daf-16 transcriptional activity is negatively regulated by cytoplasmic sequestration by association with ftt-2. Inhibition is required for the carbon [...]
      
 0.807
hsp-3
Heat shock 70 kDa protein C; Probably plays a role in facilitating the assembly of multimeric protein complexes inside the ER.
    
 
 0.789
hsp-12.3
SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family.
     
 0.787
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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