STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssq-2Sperm-Specific family, class Q. (405 aa)    
Predicted Functional Partners:
spch-2
SPerm CHromatin enriched.
   
    0.999
C15C6.2
Uncharacterized protein.
   
    0.999
C39H7.1
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
   0.999
ssq-1
Sperm-Specific family, class Q.
  
  
0.999
spch-3
SPerm CHromatin enriched.
   
    0.999
ssq-3
Sperm-Specific family, class Q.
  
   
0.999
ssq-4
Sperm-Specific family, class Q.
  
  
0.995
C04G2.9
Uncharacterized protein.
   
    0.955
sss-1
Sperm-Specific family, class S.
   
  
 0.952
ssp-19
Sperm-specific class P protein 19.
   
 
 0.930
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.