Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cnc-9 | col-2 | R13D7.11.1 | W01B6.7.1 | CaeNaCin (Caenorhabditis bacteriocin). | Cuticle collagen 2; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.670 |
| cnc-9 | col-37 | R13D7.11.1 | ZK863.2.1 | CaeNaCin (Caenorhabditis bacteriocin). | Col_cuticle_N domain-containing protein. | 0.820 |
| cnc-9 | gst-17 | R13D7.11.1 | F37B1.6.1 | CaeNaCin (Caenorhabditis bacteriocin). | Glutathione S-Transferase. | 0.759 |
| cnc-9 | gst-18 | R13D7.11.1 | F37B1.7.1 | CaeNaCin (Caenorhabditis bacteriocin). | Glutathione S-Transferase; Belongs to the GST superfamily. | 0.808 |
| cnc-9 | gstk-2 | R13D7.11.1 | D2024.7.1 | CaeNaCin (Caenorhabditis bacteriocin). | Glutathione s-transferase kappa 2; Has roles in respiratory and lipid metabolism. | 0.805 |
| col-102 | col-2 | C18H7.3.1 | W01B6.7.1 | Col_cuticle_N domain-containing protein. | Cuticle collagen 2; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.534 |
| col-102 | col-84 | C18H7.3.1 | K12D12.3.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.457 |
| col-102 | grl-23 | C18H7.3.1 | E02A10.2a.1 | Col_cuticle_N domain-containing protein. | GRound-Like (Grd related). | 0.406 |
| col-2 | cnc-9 | W01B6.7.1 | R13D7.11.1 | Cuticle collagen 2; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | CaeNaCin (Caenorhabditis bacteriocin). | 0.670 |
| col-2 | col-102 | W01B6.7.1 | C18H7.3.1 | Cuticle collagen 2; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Col_cuticle_N domain-containing protein. | 0.534 |
| col-2 | col-37 | W01B6.7.1 | ZK863.2.1 | Cuticle collagen 2; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Col_cuticle_N domain-containing protein. | 0.761 |
| col-2 | col-8 | W01B6.7.1 | F11H8.3.1 | Cuticle collagen 2; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Cuticle collagen 8; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.810 |
| col-2 | col-84 | W01B6.7.1 | K12D12.3.1 | Cuticle collagen 2; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Col_cuticle_N domain-containing protein. | 0.592 |
| col-2 | cut-1 | W01B6.7.1 | C47G2.1.1 | Cuticle collagen 2; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Cuticlin-1; Component of the cuticles. It forms a ribbon approximately 2 microns wide running along the lateral lines underneath the alae. Contributes to the formation of extracellular envelopes protecting the organism from the environment. | 0.612 |
| col-2 | grl-23 | W01B6.7.1 | E02A10.2a.1 | Cuticle collagen 2; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | GRound-Like (Grd related). | 0.547 |
| col-2 | gst-17 | W01B6.7.1 | F37B1.6.1 | Cuticle collagen 2; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Glutathione S-Transferase. | 0.535 |
| col-2 | gst-18 | W01B6.7.1 | F37B1.7.1 | Cuticle collagen 2; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Glutathione S-Transferase; Belongs to the GST superfamily. | 0.660 |
| col-2 | gstk-2 | W01B6.7.1 | D2024.7.1 | Cuticle collagen 2; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Glutathione s-transferase kappa 2; Has roles in respiratory and lipid metabolism. | 0.586 |
| col-37 | cnc-9 | ZK863.2.1 | R13D7.11.1 | Col_cuticle_N domain-containing protein. | CaeNaCin (Caenorhabditis bacteriocin). | 0.820 |
| col-37 | col-2 | ZK863.2.1 | W01B6.7.1 | Col_cuticle_N domain-containing protein. | Cuticle collagen 2; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.761 |
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