STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
haf-4HAlF transporter (PGP related). (787 aa)    
Predicted Functional Partners:
haf-9
ABC transmembrane type-1 domain-containing protein.
  
0.977
haf-7
HAlF transporter (PGP related).
  
 
 
0.909
glt-7
Amino acid transporter.
  
 
 0.831
F49E2.5
Uncharacterized protein.
   
  
 0.828
apb-3
AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.
    
 
 0.737
acs-7
Fatty Acid CoA Synthetase family.
 
 
  
 0.718
glo-1
Gut granule LOss.
   
  
 0.611
cup-5
PKD_channel domain-containing protein.
   
  
 0.606
pgp-9
p-GlycoProtein related.
  
 
0.601
pgp-3
Multidrug resistance protein pgp-3; Mediates ATP-dependent export of organic anions and xenobiotics from the cytoplasm. Hydrolyzes ATP with low efficiency (By similarity); Belongs to the ABC transporter superfamily. ABCB family. Multidrug resistance exporter (TC 3.A.1.201) subfamily.
  
 
0.580
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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