Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
T09B4.2 | gei-18 | T09B4.2.2 | Y37A1B.15.1 | Uncharacterized protein. | GEX Interacting protein. | 0.460 |
T09B4.2 | lap-1 | T09B4.2.2 | ZK353.6.1 | Uncharacterized protein. | Leucine aminopeptidase 1; Probably acts as a digestive enzyme. | 0.699 |
T09B4.2 | ooc-3 | T09B4.2.2 | B0334.11a.1 | Uncharacterized protein. | Uncharacterized protein. | 0.825 |
T09B4.2 | ooc-5 | T09B4.2.2 | C18E9.11b.1 | Uncharacterized protein. | Torsin-like protein; May serve as a molecular chaperone assisting in the proper folding of secreted and/or membrane proteins; Belongs to the ClpA/ClpB family. Torsin subfamily. | 0.814 |
T09B4.2 | rho-1 | T09B4.2.2 | Y51H4A.3a.1 | Uncharacterized protein. | Ras-like GTP-binding protein rhoA; Required for ventral migration of epidermal cells during ventral enclosure in the embryo and for cell elongation. Also required for ventral migration of P cells during larval development. Involved in asymmetric spindle positioning during anaphase and establishment of cell polarity during embryo development. In adults, involved in regulation of multiple processes including locomotion, pharyngeal pumping, fecundity, ovulation, defecation and body morphology. In body wall muscles, regulates organization of myosin thick filaments downstream of unc-89. Ass [...] | 0.516 |
T09B4.2 | sptl-1 | T09B4.2.2 | C23H3.4a.2 | Uncharacterized protein. | Serine palmitoyltransferase 1; Component of the serine palmitoyltransferase (SPT) that catalyzes the first committed step in sphingolipid biosynthesis, which is the condensation of an acyl-CoA species and L-serine. The catalytic core is composed of a heterodimer of sptl-1 and sptl-2 or sptl-1 and sptl-3 (By similarity). Required for the specification of abicobasal polarity and development of the gut lumen. | 0.421 |
T09B4.2 | sqv-1 | T09B4.2.2 | D2096.4a.1 | Uncharacterized protein. | NAD(P)-bd_dom domain-containing protein. | 0.594 |
gei-18 | T09B4.2 | Y37A1B.15.1 | T09B4.2.2 | GEX Interacting protein. | Uncharacterized protein. | 0.460 |
gei-18 | lap-1 | Y37A1B.15.1 | ZK353.6.1 | GEX Interacting protein. | Leucine aminopeptidase 1; Probably acts as a digestive enzyme. | 0.699 |
gei-18 | ooc-3 | Y37A1B.15.1 | B0334.11a.1 | GEX Interacting protein. | Uncharacterized protein. | 0.806 |
gei-18 | ooc-5 | Y37A1B.15.1 | C18E9.11b.1 | GEX Interacting protein. | Torsin-like protein; May serve as a molecular chaperone assisting in the proper folding of secreted and/or membrane proteins; Belongs to the ClpA/ClpB family. Torsin subfamily. | 0.804 |
gei-18 | rho-1 | Y37A1B.15.1 | Y51H4A.3a.1 | GEX Interacting protein. | Ras-like GTP-binding protein rhoA; Required for ventral migration of epidermal cells during ventral enclosure in the embryo and for cell elongation. Also required for ventral migration of P cells during larval development. Involved in asymmetric spindle positioning during anaphase and establishment of cell polarity during embryo development. In adults, involved in regulation of multiple processes including locomotion, pharyngeal pumping, fecundity, ovulation, defecation and body morphology. In body wall muscles, regulates organization of myosin thick filaments downstream of unc-89. Ass [...] | 0.516 |
gei-18 | sptl-1 | Y37A1B.15.1 | C23H3.4a.2 | GEX Interacting protein. | Serine palmitoyltransferase 1; Component of the serine palmitoyltransferase (SPT) that catalyzes the first committed step in sphingolipid biosynthesis, which is the condensation of an acyl-CoA species and L-serine. The catalytic core is composed of a heterodimer of sptl-1 and sptl-2 or sptl-1 and sptl-3 (By similarity). Required for the specification of abicobasal polarity and development of the gut lumen. | 0.403 |
gei-18 | sqv-1 | Y37A1B.15.1 | D2096.4a.1 | GEX Interacting protein. | NAD(P)-bd_dom domain-containing protein. | 0.402 |
lap-1 | T09B4.2 | ZK353.6.1 | T09B4.2.2 | Leucine aminopeptidase 1; Probably acts as a digestive enzyme. | Uncharacterized protein. | 0.699 |
lap-1 | gei-18 | ZK353.6.1 | Y37A1B.15.1 | Leucine aminopeptidase 1; Probably acts as a digestive enzyme. | GEX Interacting protein. | 0.699 |
ooc-3 | T09B4.2 | B0334.11a.1 | T09B4.2.2 | Uncharacterized protein. | Uncharacterized protein. | 0.825 |
ooc-3 | gei-18 | B0334.11a.1 | Y37A1B.15.1 | Uncharacterized protein. | GEX Interacting protein. | 0.806 |
ooc-3 | ooc-5 | B0334.11a.1 | C18E9.11b.1 | Uncharacterized protein. | Torsin-like protein; May serve as a molecular chaperone assisting in the proper folding of secreted and/or membrane proteins; Belongs to the ClpA/ClpB family. Torsin subfamily. | 0.858 |
ooc-5 | T09B4.2 | C18E9.11b.1 | T09B4.2.2 | Torsin-like protein; May serve as a molecular chaperone assisting in the proper folding of secreted and/or membrane proteins; Belongs to the ClpA/ClpB family. Torsin subfamily. | Uncharacterized protein. | 0.814 |
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