STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Y38H8A.2RING-type domain-containing protein. (255 aa)    
Predicted Functional Partners:
H34I24.1
Uncharacterized protein.
   
    0.541
C47E12.11
Uncharacterized protein.
   
    0.538
F42A9.7
Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod.
   
    0.538
H32C10.1
Uncharacterized protein.
   
    0.537
comp-1
Protein kinase domain-containing protein.
   
    0.536
W01B6.6
Uncharacterized protein.
   
    0.536
ZK354.6
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
    0.536
wht-8
ABC transporter domain-containing protein.
   
    0.522
K01H12.4
Uncharacterized protein.
   
    0.473
acdh-5
Acyl CoA DeHydrogenase.
   
    0.468
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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