Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F54D11.4 | F59E12.1 | F54D11.4.1 | F59E12.1.1 | Uncharacterized protein. | Bromo domain-containing protein. | 0.946 |
F54D11.4 | Y14H12B.1 | F54D11.4.1 | Y14H12B.1a.1 | Uncharacterized protein. | Uncharacterized protein. | 0.946 |
F54D11.4 | ogt-1 | F54D11.4.1 | K04G7.3a.2 | Uncharacterized protein. | UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase; Addition of nucleotide-activated sugars directly onto the polypeptide through O-glycosidic linkage with the hydroxyl of serine or threonine. | 0.747 |
F54D11.4 | set-26 | F54D11.4.1 | Y51H4A.12.1 | Uncharacterized protein. | Histone-lysine N-methyltransferase set-26; Histone methyltransferase that mediates trimethylation of 'Lys-9' of histone H3 in vitro. Involved in transcriptional regulation. Plays a role in the negative regulation of lifespan and in heat resistance. Together with set-9, negatively regulates lifespan in a germline-independent, partially daf-16-dependent fashion. Together with set-9, plays a role in germline development and maintenance and might play a role in the restriction of the trimethylation mark on histone H3 'Lys-4'(H3K4me3) to target genes specifically in the germline. Together w [...] | 0.803 |
F54D11.4 | sumv-2 | F54D11.4.1 | F54D11.2.3 | Uncharacterized protein. | Protein sumv-2; Influences the activity of genes involved in vulval development. | 0.872 |
F59E12.1 | F54D11.4 | F59E12.1.1 | F54D11.4.1 | Bromo domain-containing protein. | Uncharacterized protein. | 0.946 |
F59E12.1 | Y14H12B.1 | F59E12.1.1 | Y14H12B.1a.1 | Bromo domain-containing protein. | Uncharacterized protein. | 0.947 |
F59E12.1 | ogt-1 | F59E12.1.1 | K04G7.3a.2 | Bromo domain-containing protein. | UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase; Addition of nucleotide-activated sugars directly onto the polypeptide through O-glycosidic linkage with the hydroxyl of serine or threonine. | 0.760 |
F59E12.1 | set-26 | F59E12.1.1 | Y51H4A.12.1 | Bromo domain-containing protein. | Histone-lysine N-methyltransferase set-26; Histone methyltransferase that mediates trimethylation of 'Lys-9' of histone H3 in vitro. Involved in transcriptional regulation. Plays a role in the negative regulation of lifespan and in heat resistance. Together with set-9, negatively regulates lifespan in a germline-independent, partially daf-16-dependent fashion. Together with set-9, plays a role in germline development and maintenance and might play a role in the restriction of the trimethylation mark on histone H3 'Lys-4'(H3K4me3) to target genes specifically in the germline. Together w [...] | 0.821 |
F59E12.1 | sumv-2 | F59E12.1.1 | F54D11.2.3 | Bromo domain-containing protein. | Protein sumv-2; Influences the activity of genes involved in vulval development. | 0.940 |
Y14H12B.1 | F54D11.4 | Y14H12B.1a.1 | F54D11.4.1 | Uncharacterized protein. | Uncharacterized protein. | 0.946 |
Y14H12B.1 | F59E12.1 | Y14H12B.1a.1 | F59E12.1.1 | Uncharacterized protein. | Bromo domain-containing protein. | 0.947 |
Y14H12B.1 | ogt-1 | Y14H12B.1a.1 | K04G7.3a.2 | Uncharacterized protein. | UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase; Addition of nucleotide-activated sugars directly onto the polypeptide through O-glycosidic linkage with the hydroxyl of serine or threonine. | 0.747 |
Y14H12B.1 | set-26 | Y14H12B.1a.1 | Y51H4A.12.1 | Uncharacterized protein. | Histone-lysine N-methyltransferase set-26; Histone methyltransferase that mediates trimethylation of 'Lys-9' of histone H3 in vitro. Involved in transcriptional regulation. Plays a role in the negative regulation of lifespan and in heat resistance. Together with set-9, negatively regulates lifespan in a germline-independent, partially daf-16-dependent fashion. Together with set-9, plays a role in germline development and maintenance and might play a role in the restriction of the trimethylation mark on histone H3 'Lys-4'(H3K4me3) to target genes specifically in the germline. Together w [...] | 0.803 |
Y14H12B.1 | sumv-2 | Y14H12B.1a.1 | F54D11.2.3 | Uncharacterized protein. | Protein sumv-2; Influences the activity of genes involved in vulval development. | 0.868 |
jmjd-2 | set-25 | Y48B6A.11.1 | Y43F4B.3.1 | Lysine-specific demethylase 4; Histone demethylase that specifically demethylates 'Lys-9' and 'Lys-36' residues of histone H3, thereby playing a central role in histone code. Demethylation of Lys residue generates formaldehyde and succinate. Involved in the negative regulation of lifespan in a germline-dependent fashion. | Histone-lysine N-methyltransferase set-25; Histone methyltransferase that specifically trimethylates 'Lys-9' of histone H3 using mono- and dimethylated H3 'Lys-9' as substrate. Acts redundantly with the methyltransferase met-2 to position chromosome arms at the nuclear lamina. Required for small-RNA-induced H3K9 methylation. Together with met-2, protects and stabilizes repeat-rich genomic regions by suppressing transcription- induced replication stress through methylation of H3K9. | 0.750 |
jmjd-2 | set-26 | Y48B6A.11.1 | Y51H4A.12.1 | Lysine-specific demethylase 4; Histone demethylase that specifically demethylates 'Lys-9' and 'Lys-36' residues of histone H3, thereby playing a central role in histone code. Demethylation of Lys residue generates formaldehyde and succinate. Involved in the negative regulation of lifespan in a germline-dependent fashion. | Histone-lysine N-methyltransferase set-26; Histone methyltransferase that mediates trimethylation of 'Lys-9' of histone H3 in vitro. Involved in transcriptional regulation. Plays a role in the negative regulation of lifespan and in heat resistance. Together with set-9, negatively regulates lifespan in a germline-independent, partially daf-16-dependent fashion. Together with set-9, plays a role in germline development and maintenance and might play a role in the restriction of the trimethylation mark on histone H3 'Lys-4'(H3K4me3) to target genes specifically in the germline. Together w [...] | 0.779 |
jmjd-2 | set-30 | Y48B6A.11.1 | ZC8.3.1 | Lysine-specific demethylase 4; Histone demethylase that specifically demethylates 'Lys-9' and 'Lys-36' residues of histone H3, thereby playing a central role in histone code. Demethylation of Lys residue generates formaldehyde and succinate. Involved in the negative regulation of lifespan in a germline-dependent fashion. | MYND-type domain-containing protein. | 0.774 |
jmjd-2 | set-32 | Y48B6A.11.1 | C41G7.4.1 | Lysine-specific demethylase 4; Histone demethylase that specifically demethylates 'Lys-9' and 'Lys-36' residues of histone H3, thereby playing a central role in histone code. Demethylation of Lys residue generates formaldehyde and succinate. Involved in the negative regulation of lifespan in a germline-dependent fashion. | SET domain-containing protein. | 0.572 |
jmjd-2 | utx-1 | Y48B6A.11.1 | D2021.1a.1 | Lysine-specific demethylase 4; Histone demethylase that specifically demethylates 'Lys-9' and 'Lys-36' residues of histone H3, thereby playing a central role in histone code. Demethylation of Lys residue generates formaldehyde and succinate. Involved in the negative regulation of lifespan in a germline-dependent fashion. | UTX (Ubiquitously transcribed TPR on X) homolog. | 0.941 |
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