Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
col-104 | col-113 | F58F6.1.1 | C34D4.15a.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.606 |
col-104 | col-14 | F58F6.1.1 | C46A5.3a.1 | Col_cuticle_N domain-containing protein. | Cuticle collagen 14; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.984 |
col-104 | col-48 | F58F6.1.1 | Y54E10BL.2.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.637 |
col-104 | col-97 | F58F6.1.1 | ZK1010.7.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.887 |
col-104 | grl-16 | F58F6.1.1 | Y65B4BR.6b.1 | Col_cuticle_N domain-containing protein. | Ground-like domain-containing protein. | 0.681 |
col-113 | col-104 | C34D4.15a.1 | F58F6.1.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.606 |
col-113 | col-14 | C34D4.15a.1 | C46A5.3a.1 | Col_cuticle_N domain-containing protein. | Cuticle collagen 14; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.544 |
col-113 | col-48 | C34D4.15a.1 | Y54E10BL.2.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.643 |
col-113 | col-97 | C34D4.15a.1 | ZK1010.7.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.568 |
col-113 | grl-16 | C34D4.15a.1 | Y65B4BR.6b.1 | Col_cuticle_N domain-containing protein. | Ground-like domain-containing protein. | 0.469 |
col-14 | col-104 | C46A5.3a.1 | F58F6.1.1 | Cuticle collagen 14; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Col_cuticle_N domain-containing protein. | 0.984 |
col-14 | col-113 | C46A5.3a.1 | C34D4.15a.1 | Cuticle collagen 14; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Col_cuticle_N domain-containing protein. | 0.544 |
col-14 | col-48 | C46A5.3a.1 | Y54E10BL.2.1 | Cuticle collagen 14; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Col_cuticle_N domain-containing protein. | 0.677 |
col-14 | col-97 | C46A5.3a.1 | ZK1010.7.1 | Cuticle collagen 14; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Col_cuticle_N domain-containing protein. | 0.938 |
col-14 | grl-16 | C46A5.3a.1 | Y65B4BR.6b.1 | Cuticle collagen 14; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | Ground-like domain-containing protein. | 0.658 |
col-140 | col-48 | F26F12.1.1 | Y54E10BL.2.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.660 |
col-153 | col-48 | F17C11.3.1 | Y54E10BL.2.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.704 |
col-48 | col-104 | Y54E10BL.2.1 | F58F6.1.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.637 |
col-48 | col-113 | Y54E10BL.2.1 | C34D4.15a.1 | Col_cuticle_N domain-containing protein. | Col_cuticle_N domain-containing protein. | 0.643 |
col-48 | col-14 | Y54E10BL.2.1 | C46A5.3a.1 | Col_cuticle_N domain-containing protein. | Cuticle collagen 14; Nematode cuticles are composed largely of collagen-like proteins. The cuticle functions both as an exoskeleton and as a barrier to protect the worm from its environment. | 0.677 |
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