STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
col-86Col_cuticle_N domain-containing protein. (323 aa)    
Predicted Functional Partners:
apd-3
AP-3 complex subunit delta; Belongs to the adaptor complexes large subunit family.
      
 0.800
col-166
Col_cuticle_N domain-containing protein.
      
 0.741
apm-3
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
      
 0.695
apb-3
AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family.
      
 0.668
aps-3
Clat_adaptor_s domain-containing protein.
      
 0.661
col-93
Col_cuticle_N domain-containing protein.
  
   
 0.657
col-178
Col_cuticle_N domain-containing protein.
  
     0.468
max-1
Motor AXon guidance.
      
 0.463
col-20
Col_cuticle_N domain-containing protein.
  
     0.462
col-179
Col_cuticle_N domain-containing protein.
  
     0.457
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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