STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clec-261C-type lectin domain-containing protein. (230 aa)    
Predicted Functional Partners:
F46A8.3
Galectin.
   
  
 0.924
famk-1
Extracellular serine/threonine protein kinase CeFam20; Golgi serine/threonine protein kinase that phosphorylates secretory pathway proteins within Ser-x-Glu/pSer motifs. Belongs to the FAM20 family.
    
 
 0.892
pfd-6
Probable prefoldin subunit 6; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins (By similarity). Required for positioning of the mitotic spindle.
   
   0.859
Y6B3B.1
Uncharacterized protein.
   
   0.859
srw-119
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
   0.848
srr-7
Serpentine Receptor, class R.
   
   0.848
srw-133
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
   0.848
srw-66
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
   0.848
C01F1.4
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
    0.846
srx-39
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
    0.846
Your Current Organism:
Caenorhabditis elegans
NCBI taxonomy Id: 6239
Other names: C. elegans, Rhabditis elegans, roundworm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.