Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C42C1.8 | T22D1.5 | C42C1.8.1 | T22D1.5.1 | Uncharacterized protein. | Uncharacterized protein. | 0.551 |
C42C1.8 | ZC434.8 | C42C1.8.1 | ZC434.8.2 | Uncharacterized protein. | Probable arginine kinase ZC434.8. | 0.547 |
C42C1.8 | rnf-1 | C42C1.8.1 | C06A5.9.1 | Uncharacterized protein. | RING-type domain-containing protein. | 0.461 |
C42C1.8 | wago-1 | C42C1.8.1 | R06C7.1.1 | Uncharacterized protein. | Argonaute protein wago-1; Argonaute protein which is involved in the endogenous small interfering RNA (endo-siRNA) pathway. Interacts with secondary 22G- RNAs, which are RNA-dependent RNA polymerase-derived endo-siRNAs, typically 22 nucleotides in length with a 5'guanosine residue. In the germline, functions in a genome surveillance system to silence transposons and aberrant transcripts. | 0.538 |
T22D1.5 | C42C1.8 | T22D1.5.1 | C42C1.8.1 | Uncharacterized protein. | Uncharacterized protein. | 0.551 |
T22D1.5 | ZC434.8 | T22D1.5.1 | ZC434.8.2 | Uncharacterized protein. | Probable arginine kinase ZC434.8. | 0.538 |
T22D1.5 | rnf-1 | T22D1.5.1 | C06A5.9.1 | Uncharacterized protein. | RING-type domain-containing protein. | 0.538 |
T22D1.5 | wago-1 | T22D1.5.1 | R06C7.1.1 | Uncharacterized protein. | Argonaute protein wago-1; Argonaute protein which is involved in the endogenous small interfering RNA (endo-siRNA) pathway. Interacts with secondary 22G- RNAs, which are RNA-dependent RNA polymerase-derived endo-siRNAs, typically 22 nucleotides in length with a 5'guanosine residue. In the germline, functions in a genome surveillance system to silence transposons and aberrant transcripts. | 0.519 |
ZC434.8 | C42C1.8 | ZC434.8.2 | C42C1.8.1 | Probable arginine kinase ZC434.8. | Uncharacterized protein. | 0.547 |
ZC434.8 | T22D1.5 | ZC434.8.2 | T22D1.5.1 | Probable arginine kinase ZC434.8. | Uncharacterized protein. | 0.538 |
ZC434.8 | gpd-4 | ZC434.8.2 | F33H1.2.2 | Probable arginine kinase ZC434.8. | Glyceraldehyde-3-phosphate dehydrogenase 4. | 0.608 |
ZC434.8 | hlh-2 | ZC434.8.2 | M05B5.5a.1 | Probable arginine kinase ZC434.8. | BHLH domain-containing protein. | 0.614 |
ZC434.8 | mlc-3 | ZC434.8.2 | F09F7.2a.1 | Probable arginine kinase ZC434.8. | Myosin, essential light chain. | 0.544 |
ZC434.8 | mlc-5 | ZC434.8.2 | T12D8.6.1 | Probable arginine kinase ZC434.8. | Myosin-2 essential light chain; Required for cytokinesis and embryo elongation. May regulate myosin II complex formation and/or the association of myosin with actin. May be involved in the organization of mlc-4 and nmy-2 into bundles. | 0.542 |
ZC434.8 | rnf-1 | ZC434.8.2 | C06A5.9.1 | Probable arginine kinase ZC434.8. | RING-type domain-containing protein. | 0.541 |
ZC434.8 | tpi-1 | ZC434.8.2 | Y17G7B.7.1 | Probable arginine kinase ZC434.8. | Triosephosphate isomerase; Triosephosphate isomerase is an extremely efficient metabolic enzyme that catalyzes the interconversion between dihydroxyacetone phosphate (DHAP) and D-glyceraldehyde-3-phosphate (G3P) in glycolysis and gluconeogenesis. | 0.568 |
ZC434.8 | ucr-2.3 | ZC434.8.2 | T24C4.1.1 | Probable arginine kinase ZC434.8. | Peptidase_M16 domain-containing protein. | 0.547 |
ZC434.8 | wago-1 | ZC434.8.2 | R06C7.1.1 | Probable arginine kinase ZC434.8. | Argonaute protein wago-1; Argonaute protein which is involved in the endogenous small interfering RNA (endo-siRNA) pathway. Interacts with secondary 22G- RNAs, which are RNA-dependent RNA polymerase-derived endo-siRNAs, typically 22 nucleotides in length with a 5'guanosine residue. In the germline, functions in a genome surveillance system to silence transposons and aberrant transcripts. | 0.538 |
gpd-4 | ZC434.8 | F33H1.2.2 | ZC434.8.2 | Glyceraldehyde-3-phosphate dehydrogenase 4. | Probable arginine kinase ZC434.8. | 0.608 |
gpd-4 | tpi-1 | F33H1.2.2 | Y17G7B.7.1 | Glyceraldehyde-3-phosphate dehydrogenase 4. | Triosephosphate isomerase; Triosephosphate isomerase is an extremely efficient metabolic enzyme that catalyzes the interconversion between dihydroxyacetone phosphate (DHAP) and D-glyceraldehyde-3-phosphate (G3P) in glycolysis and gluconeogenesis. | 0.999 |
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