Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F26A1.1 | H01M10.2 | F26A1.1.1 | H01M10.2.1 | Uncharacterized protein. | Uncharacterized protein. | 0.907 |
F26A1.1 | K09B3.1 | F26A1.1.1 | K09B3.1b.1 | Uncharacterized protein. | ShKT domain-containing protein. | 0.748 |
F26A1.1 | nfi-1 | F26A1.1.1 | ZK1290.4c.1 | Uncharacterized protein. | CTF/NF-I domain-containing protein. | 0.764 |
F26A1.1 | nhr-277 | F26A1.1.1 | Y94H6A.1.1 | Uncharacterized protein. | Nuclear Hormone Receptor family. | 0.748 |
H01M10.2 | F26A1.1 | H01M10.2.1 | F26A1.1.1 | Uncharacterized protein. | Uncharacterized protein. | 0.907 |
H01M10.2 | K09B3.1 | H01M10.2.1 | K09B3.1b.1 | Uncharacterized protein. | ShKT domain-containing protein. | 0.697 |
H01M10.2 | htz-1 | H01M10.2.1 | R08C7.3.3 | Uncharacterized protein. | Histone H2A.V; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post- translational modifications of histones, also called histone code, and nucleosome remodeling (By similarity). Required to maintain non-distal tip cell (DTC) fate of somatic gonadal [...] | 0.422 |
H01M10.2 | mix-1 | H01M10.2.1 | M106.1.1 | Uncharacterized protein. | Mitotic chromosome and X-chromosome-associated protein mix-1; Essential protein required for both chromosome condensation and segregation and X-chromosome dosage compensation depending on its binding partners. Central component of the condensin I complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases. Converts nicked DNA into positive knotted forms in the presence of type II topoisomerases (By similarity). Central component o [...] | 0.468 |
H01M10.2 | nfi-1 | H01M10.2.1 | ZK1290.4c.1 | Uncharacterized protein. | CTF/NF-I domain-containing protein. | 0.700 |
H01M10.2 | nhr-277 | H01M10.2.1 | Y94H6A.1.1 | Uncharacterized protein. | Nuclear Hormone Receptor family. | 0.697 |
K09B3.1 | F26A1.1 | K09B3.1b.1 | F26A1.1.1 | ShKT domain-containing protein. | Uncharacterized protein. | 0.748 |
K09B3.1 | H01M10.2 | K09B3.1b.1 | H01M10.2.1 | ShKT domain-containing protein. | Uncharacterized protein. | 0.697 |
K09B3.1 | nfi-1 | K09B3.1b.1 | ZK1290.4c.1 | ShKT domain-containing protein. | CTF/NF-I domain-containing protein. | 0.759 |
K09B3.1 | nhr-277 | K09B3.1b.1 | Y94H6A.1.1 | ShKT domain-containing protein. | Nuclear Hormone Receptor family. | 0.917 |
hlh-27 | nfi-1 | C17C3.10.1 | ZK1290.4c.1 | BHLH domain-containing protein. | CTF/NF-I domain-containing protein. | 0.660 |
htz-1 | H01M10.2 | R08C7.3.3 | H01M10.2.1 | Histone H2A.V; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post- translational modifications of histones, also called histone code, and nucleosome remodeling (By similarity). Required to maintain non-distal tip cell (DTC) fate of somatic gonadal [...] | Uncharacterized protein. | 0.422 |
htz-1 | mix-1 | R08C7.3.3 | M106.1.1 | Histone H2A.V; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post- translational modifications of histones, also called histone code, and nucleosome remodeling (By similarity). Required to maintain non-distal tip cell (DTC) fate of somatic gonadal [...] | Mitotic chromosome and X-chromosome-associated protein mix-1; Essential protein required for both chromosome condensation and segregation and X-chromosome dosage compensation depending on its binding partners. Central component of the condensin I complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases. Converts nicked DNA into positive knotted forms in the presence of type II topoisomerases (By similarity). Central component o [...] | 0.667 |
htz-1 | nfi-1 | R08C7.3.3 | ZK1290.4c.1 | Histone H2A.V; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post- translational modifications of histones, also called histone code, and nucleosome remodeling (By similarity). Required to maintain non-distal tip cell (DTC) fate of somatic gonadal [...] | CTF/NF-I domain-containing protein. | 0.647 |
mix-1 | H01M10.2 | M106.1.1 | H01M10.2.1 | Mitotic chromosome and X-chromosome-associated protein mix-1; Essential protein required for both chromosome condensation and segregation and X-chromosome dosage compensation depending on its binding partners. Central component of the condensin I complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases. Converts nicked DNA into positive knotted forms in the presence of type II topoisomerases (By similarity). Central component o [...] | Uncharacterized protein. | 0.468 |
mix-1 | htz-1 | M106.1.1 | R08C7.3.3 | Mitotic chromosome and X-chromosome-associated protein mix-1; Essential protein required for both chromosome condensation and segregation and X-chromosome dosage compensation depending on its binding partners. Central component of the condensin I complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases. Converts nicked DNA into positive knotted forms in the presence of type II topoisomerases (By similarity). Central component o [...] | Histone H2A.V; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post- translational modifications of histones, also called histone code, and nucleosome remodeling (By similarity). Required to maintain non-distal tip cell (DTC) fate of somatic gonadal [...] | 0.667 |
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