Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
acd-5 | best-24 | T28F2.7.1 | ZK688.2.1 | Uncharacterized protein; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | Bestrophin homolog 24; Forms chloride channels. | 0.699 |
acd-5 | kvs-4 | T28F2.7.1 | Y48A6B.6b.1 | Uncharacterized protein; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | Probable voltage-gated potassium channel subunit kvs-4; Voltage-gated potassium channel that mediates transmembrane potassium transport in excitable membranes. | 0.660 |
acd-5 | lgc-53 | T28F2.7.1 | T21F2.1a.1 | Uncharacterized protein; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | Ligand-Gated ion Channel; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 0.426 |
best-24 | acd-5 | ZK688.2.1 | T28F2.7.1 | Bestrophin homolog 24; Forms chloride channels. | Uncharacterized protein; Belongs to the amiloride-sensitive sodium channel (TC 1.A.6) family. | 0.699 |
best-24 | che-6 | ZK688.2.1 | C23H5.7.1 | Bestrophin homolog 24; Forms chloride channels. | Cyclic nucleotide-binding domain-containing protein. | 0.663 |
best-24 | clh-1 | ZK688.2.1 | T27D12.2a.1 | Bestrophin homolog 24; Forms chloride channels. | Chloride channel protein. | 0.617 |
best-24 | clh-5 | ZK688.2.1 | C07H4.2.1 | Bestrophin homolog 24; Forms chloride channels. | Chloride channel protein. | 0.700 |
best-24 | clh-6 | ZK688.2.1 | R07B7.1.1 | Bestrophin homolog 24; Forms chloride channels. | Chloride channel protein. | 0.692 |
best-24 | gab-1 | ZK688.2.1 | ZC482.1.1 | Bestrophin homolog 24; Forms chloride channels. | Gamma-aminobutyric acid receptor subunit beta; GABA, an inhibitory neurotransmitter, mediates neuronal inhibition by binding to the GABA receptor and opening an integral chloride channel; Belongs to the ligand-gated ion channel (TC 1.A.9) family. Gamma-aminobutyric acid receptor (TC 1.A.9.5) subfamily. | 0.671 |
best-24 | kcnl-2 | ZK688.2.1 | F08A10.1j.1 | Bestrophin homolog 24; Forms chloride channels. | CaMBD domain-containing protein. | 0.676 |
best-24 | kvs-4 | ZK688.2.1 | Y48A6B.6b.1 | Bestrophin homolog 24; Forms chloride channels. | Probable voltage-gated potassium channel subunit kvs-4; Voltage-gated potassium channel that mediates transmembrane potassium transport in excitable membranes. | 0.758 |
best-24 | lgc-53 | ZK688.2.1 | T21F2.1a.1 | Bestrophin homolog 24; Forms chloride channels. | Ligand-Gated ion Channel; Belongs to the ligand-gated ion channel (TC 1.A.9) family. | 0.692 |
best-24 | twk-47 | ZK688.2.1 | F33D11.5.1 | Bestrophin homolog 24; Forms chloride channels. | Ion_trans_2 domain-containing protein. | 0.740 |
che-6 | best-24 | C23H5.7.1 | ZK688.2.1 | Cyclic nucleotide-binding domain-containing protein. | Bestrophin homolog 24; Forms chloride channels. | 0.663 |
che-6 | kvs-4 | C23H5.7.1 | Y48A6B.6b.1 | Cyclic nucleotide-binding domain-containing protein. | Probable voltage-gated potassium channel subunit kvs-4; Voltage-gated potassium channel that mediates transmembrane potassium transport in excitable membranes. | 0.666 |
clh-1 | best-24 | T27D12.2a.1 | ZK688.2.1 | Chloride channel protein. | Bestrophin homolog 24; Forms chloride channels. | 0.617 |
clh-1 | twk-47 | T27D12.2a.1 | F33D11.5.1 | Chloride channel protein. | Ion_trans_2 domain-containing protein. | 0.463 |
clh-5 | best-24 | C07H4.2.1 | ZK688.2.1 | Chloride channel protein. | Bestrophin homolog 24; Forms chloride channels. | 0.700 |
clh-5 | clh-6 | C07H4.2.1 | R07B7.1.1 | Chloride channel protein. | Chloride channel protein. | 0.507 |
clh-6 | best-24 | R07B7.1.1 | ZK688.2.1 | Chloride channel protein. | Bestrophin homolog 24; Forms chloride channels. | 0.692 |
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