Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C36H8.1 | F32H2.7 | C36H8.1.1 | F32H2.7.1 | Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod. | Uncharacterized protein. | 0.941 |
C36H8.1 | alg-3 | C36H8.1.1 | T22B3.2b.1 | Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod. | Argonaute (Plant)-Like protein. | 0.618 |
C36H8.1 | alg-4 | C36H8.1.1 | ZK757.3a.1 | Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod. | Putative protein tag-76. | 0.839 |
C36H8.1 | wago-10 | C36H8.1.1 | T22H9.3.1 | Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod. | Piwi-like protein; Belongs to the argonaute family. | 0.532 |
F32H2.7 | C36H8.1 | F32H2.7.1 | C36H8.1.1 | Uncharacterized protein. | Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod. | 0.941 |
F32H2.7 | alg-3 | F32H2.7.1 | T22B3.2b.1 | Uncharacterized protein. | Argonaute (Plant)-Like protein. | 0.619 |
F32H2.7 | alg-4 | F32H2.7.1 | ZK757.3a.1 | Uncharacterized protein. | Putative protein tag-76. | 0.774 |
F32H2.7 | wago-10 | F32H2.7.1 | T22H9.3.1 | Uncharacterized protein. | Piwi-like protein; Belongs to the argonaute family. | 0.422 |
alg-3 | C36H8.1 | T22B3.2b.1 | C36H8.1.1 | Argonaute (Plant)-Like protein. | Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod. | 0.618 |
alg-3 | F32H2.7 | T22B3.2b.1 | F32H2.7.1 | Argonaute (Plant)-Like protein. | Uncharacterized protein. | 0.619 |
alg-3 | alg-4 | T22B3.2b.1 | ZK757.3a.1 | Argonaute (Plant)-Like protein. | Putative protein tag-76. | 0.767 |
alg-3 | dcr-1 | T22B3.2b.1 | K12H4.8.2 | Argonaute (Plant)-Like protein. | Death-promoting deoxyribonuclease; Involved in cleaving double-stranded RNA in the RNA interference (RNAi) pathway. It produces 21 to 23 bp dsRNAs (siRNAs) which target the selective destruction of homologous RNAs. Seems to process the precursor of the small temporal RNA let-7 which is involved in developmental timing. Belongs to the helicase family. Dicer subfamily. | 0.847 |
alg-3 | ego-1 | T22B3.2b.1 | F26A3.3.1 | Argonaute (Plant)-Like protein. | RNA-directed RNA polymerase related EGO-1. | 0.826 |
alg-3 | ergo-1 | T22B3.2b.1 | R09A1.1a.1 | Argonaute (Plant)-Like protein. | Piwi-like protein ergo-1; Argonaute protein required for gene silencing in the endogenous RNA interference (RNAi) pathway. Involved in the 26G RNAi pathway and associates with both unmethylated and methylated 26G small interfering RNAs (26G- siRNAs), which are a class of 26 nucleotide siRNAs that possess a guanine residue at the 5'-end. Associated 26G-siRNAs are methylated by the methyltransferase henn-1, which stabilizes the siRNAs. Association with 26G- siRNAs is required for the biogenesis of secondary 22G-siRNAs (a class of 22 nucleotide siRNAs that possess a triphosphorylated guan [...] | 0.620 |
alg-3 | henn-1 | T22B3.2b.1 | C02F5.6b.1 | Argonaute (Plant)-Like protein. | Small RNA 2'-O-methyltransferase; Methyltransferase that adds a 2'-O-methyl group at the 3'-end of PIWI-interacting RNAs (piRNAs) and small interfering RNAs (siRNAs) which are classes of regulatory RNAs that are involved in gene silencing in endogenous RNA interference (RNAi) pathways. Methylation protects the 3'-end of small RNAs from tailing and trimming and could constitute a recognition signal for appropriate argonaute machineries (Probable). Methylates and stabilizes 26G-siRNAs (a class of 26 nucleotide siRNAs that possess a monophosphorylated guanine residue at the 5'-end) when t [...] | 0.825 |
alg-3 | rde-4 | T22B3.2b.1 | T20G5.11.1 | Argonaute (Plant)-Like protein. | RNA interference promoting factor. | 0.853 |
alg-3 | rrf-3 | T22B3.2b.1 | F10B5.7.1 | Argonaute (Plant)-Like protein. | RNA-dependent RNA polymerase Family. | 0.728 |
alg-3 | wago-10 | T22B3.2b.1 | T22H9.3.1 | Argonaute (Plant)-Like protein. | Piwi-like protein; Belongs to the argonaute family. | 0.795 |
alg-4 | C36H8.1 | ZK757.3a.1 | C36H8.1.1 | Putative protein tag-76. | Major sperm protein; Central component in molecular interactions underlying sperm crawling. Forms an extensive filament system that extends from sperm villipoda, along the leading edge of the pseudopod. | 0.839 |
alg-4 | F32H2.7 | ZK757.3a.1 | F32H2.7.1 | Putative protein tag-76. | Uncharacterized protein. | 0.774 |
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