A0A0K0DZZ1 protein (Strongyloides stercoralis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A0K0DZZ1

Nudix hydrolase domain-containing protein. (321 aa)

Predicted Functional Partners:

A0A0K0E189

0.895

A0A0K0DUH9

0.839

A0A0K0DZ94

0.836

A0A0K0EDG3

0.784

A0A0K0E132

0.781

A0A0K0EHX5

0.781

LSM4

0.745

LSM1

0.727

A0A0K0EPJ4

0.727

A0A0K0ED20

0.689

Your Current Organism:

Strongyloides stercoralis

NCBI taxonomy Id: 6248
Other names: S. stercoralis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A0K0DUH9	A0A0K0DZ94	A0A0K0DUH9	A0A0K0DZ94	NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.	mRNA_decap_C domain-containing protein.	0.997
A0A0K0DUH9	A0A0K0DZZ1	A0A0K0DUH9	A0A0K0DZZ1	NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.	Nudix hydrolase domain-containing protein.	0.839
A0A0K0DUH9	A0A0K0E132	A0A0K0DUH9	A0A0K0E132	NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.	Uncharacterized protein.	0.949
A0A0K0DUH9	A0A0K0EDG3	A0A0K0DUH9	A0A0K0EDG3	NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.	Uncharacterized protein.	0.950
A0A0K0DUH9	A0A0K0EHX5	A0A0K0DUH9	A0A0K0EHX5	NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.	Uncharacterized protein.	0.949
A0A0K0DUH9	A0A0K0EPJ4	A0A0K0DUH9	A0A0K0EPJ4	NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.	Uncharacterized protein.	0.854
A0A0K0DUH9	LSM1	A0A0K0DUH9	A0A0K0DW39	NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	0.854
A0A0K0DUH9	LSM4	A0A0K0DUH9	A0A0K0EKL8	NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.938
A0A0K0DZ94	A0A0K0DUH9	A0A0K0DZ94	A0A0K0DUH9	mRNA_decap_C domain-containing protein.	NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.	0.997
A0A0K0DZ94	A0A0K0DZZ1	A0A0K0DZ94	A0A0K0DZZ1	mRNA_decap_C domain-containing protein.	Nudix hydrolase domain-containing protein.	0.836
A0A0K0DZ94	A0A0K0E132	A0A0K0DZ94	A0A0K0E132	mRNA_decap_C domain-containing protein.	Uncharacterized protein.	0.962
A0A0K0DZ94	A0A0K0ED20	A0A0K0DZ94	A0A0K0ED20	mRNA_decap_C domain-containing protein.	RNB domain-containing protein; Belongs to the RNR ribonuclease family.	0.826
A0A0K0DZ94	A0A0K0EDG3	A0A0K0DZ94	A0A0K0EDG3	mRNA_decap_C domain-containing protein.	Uncharacterized protein.	0.992
A0A0K0DZ94	A0A0K0EHX5	A0A0K0DZ94	A0A0K0EHX5	mRNA_decap_C domain-containing protein.	Uncharacterized protein.	0.980
A0A0K0DZ94	A0A0K0EPJ4	A0A0K0DZ94	A0A0K0EPJ4	mRNA_decap_C domain-containing protein.	Uncharacterized protein.	0.871
A0A0K0DZ94	LSM1	A0A0K0DZ94	A0A0K0DW39	mRNA_decap_C domain-containing protein.	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	0.871
A0A0K0DZ94	LSM4	A0A0K0DZ94	A0A0K0EKL8	mRNA_decap_C domain-containing protein.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.947
A0A0K0DZZ1	A0A0K0DUH9	A0A0K0DZZ1	A0A0K0DUH9	Nudix hydrolase domain-containing protein.	NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.	0.839
A0A0K0DZZ1	A0A0K0DZ94	A0A0K0DZZ1	A0A0K0DZ94	Nudix hydrolase domain-containing protein.	mRNA_decap_C domain-containing protein.	0.836
A0A0K0DZZ1	A0A0K0E132	A0A0K0DZZ1	A0A0K0E132	Nudix hydrolase domain-containing protein.	Uncharacterized protein.	0.781