STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACR30684.1Type VI secretion protein, VC_A0107 family. (152 aa)    
Predicted Functional Partners:
ACR30685.1
Type VI secretion protein, EvpB/VC_A0108 family.
 
 
 0.972
ACR30631.1
EvpB family type VI secretion protein.
 
 
 0.932
ACR27589.1
Putative type VI secretion system protein TssC.
 
 
 0.927
ACR31498.1
Type VI secretion protein, EvpB/VC_A0108 family.
 
 
 0.927
ACR30686.1
Type VI secretion system Vgr family protein.
 
  
 0.924
ACR30647.1
Virulence protein, SciE type.
 
   0.897
ACR31503.1
Type VI secretion system effector, Hcp1 family.
 
 
 0.890
ACR30632.1
Type VI secretion system effector, Hcp1 family.
 
 
 0.878
ACR31500.1
Type VI secretion protein, VC_A0114 family.
 
  
 0.877
ACR27590.1
Putative type VI secretion system protein TssD.
 
 
 0.876
Your Current Organism:
Burkholderia glumae
NCBI taxonomy Id: 626418
Other names: B. glumae BGR1, Burkholderia glumae BGR1, Burkholderia glumae str. BGR1, Burkholderia glumae strain BGR1
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