STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACR31155.1Type IV / VI secretion system protein DotU. (259 aa)    
Predicted Functional Partners:
ACR31156.1
Type VI secretion protein, VC_A0114 family.
 
  
 0.963
ACR31154.1
Type VI secretion protein IcmF.
 
 
 0.947
ACR31153.1
Type VI secretion system protein EvpK.
 
  
 0.939
ACR31161.1
Pentapeptide repeat-containing protein.
 
    0.926
ACR27584.1
OmpA family protein.
  
  
  0.925
ACR31162.1
Rhs element Vgr protein.
 
  
 0.919
ACR31158.1
Hypothetical protein.
 
    0.916
ACR31163.1
Quinoprotein dehydrogenase.
 
  
 0.916
ACR31501.1
Type IV / VI secretion system protein, DotU family.
  
  
  0.911
ACR30628.1
Type IV / VI secretion system protein, DotU family.
     
  0.900
Your Current Organism:
Burkholderia glumae
NCBI taxonomy Id: 626418
Other names: B. glumae BGR1, Burkholderia glumae BGR1, Burkholderia glumae str. BGR1, Burkholderia glumae strain BGR1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.