STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACR31503.1Type VI secretion system effector, Hcp1 family. (161 aa)    
Predicted Functional Partners:
ACR30632.1
Type VI secretion system effector, Hcp1 family.
     
 0.947
ACR31166.1
Type VI secretion system effector, Hcp1 family.
     
 0.947
ACR30685.1
Type VI secretion protein, EvpB/VC_A0108 family.
 
 
 0.928
ACR31498.1
Type VI secretion protein, EvpB/VC_A0108 family.
 
 
 0.928
ACR31505.1
Type VI secretion system lysozyme-like protein.
 
  
 0.928
ACR27590.1
Putative type VI secretion system protein TssD.
  
  
0.920
ACR31501.1
Type IV / VI secretion system protein, DotU family.
 
  
 0.912
ACR31500.1
Type VI secretion protein, VC_A0114 family.
 
  
 0.906
ACR30684.1
Type VI secretion protein, VC_A0107 family.
 
 
 0.890
ACR31499.1
Type VI secretion protein, VC_A0107 family.
 
 
 0.890
Your Current Organism:
Burkholderia glumae
NCBI taxonomy Id: 626418
Other names: B. glumae BGR1, Burkholderia glumae BGR1, Burkholderia glumae str. BGR1, Burkholderia glumae strain BGR1
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