STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLG_07700Putative esterase. (258 aa)    
Predicted Functional Partners:
SLG_07670
Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.785
SLG_07680
Hypothetical protein.
  
  
 0.777
SLG_07690
Hypothetical protein.
       0.773
SLG_07660
acyl-CoA synthetase; Protein synonym:fatty-acid--CoA ligase.
       0.768
SLG_08150
Esterase/lipase.
  
     0.759
SLG_35930
Putative esterase; Fragment.
  
     0.639
SLG_07710
Major facilitator superfamily protein.
       0.539
SLG_20070
Putative hydrolase.
 
   
 0.477
SLG_08140
Putative xylanase.
  
     0.467
SLG_07650
TonB-dependent receptor-like protein.
       0.463
Your Current Organism:
Sphingobium sp. SYK6
NCBI taxonomy Id: 627192
Other names: S. sp. SYK-6, Sphingobium sp. SYK-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.