STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLG_09170Putative ribonuclease. (362 aa)    
Predicted Functional Partners:
SLG_09190
Hypothetical protein.
       0.781
SLG_09200
Hypothetical protein.
       0.778
SLG_09180
Hypothetical protein.
       0.773
SLG_09160
Hypothetical protein.
       0.565
SLG_09220
ABC transporter substrate binding/permease protein.
 
    0.540
SLG_00220
Putative signaling protein.
  
     0.525
SLG_16490
Conserved hypothetical protein.
 
     0.483
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.438
SLG_05520
Hypothetical protein.
 
    0.437
SLG_10070
Putative response regulator receiver protein.
  
     0.412
Your Current Organism:
Sphingobium sp. SYK6
NCBI taxonomy Id: 627192
Other names: S. sp. SYK-6, Sphingobium sp. SYK-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.