Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
SLG_00910 | SLG_03840 | Hypothetical protein. | Putative signaling protein. | 0.869 |
SLG_00910 | SLG_10080 | Hypothetical protein. | Conserved hypothetical membrane protein. | 0.546 |
SLG_00910 | SLG_10500 | Hypothetical protein. | Conserved hypothetical protein. | 0.747 |
SLG_00910 | SLG_11420 | Hypothetical protein. | Conserved hypothetical protein. | 0.736 |
SLG_00910 | SLG_12330 | Hypothetical protein. | Hypothetical protein. | 0.531 |
SLG_00910 | SLG_20360 | Hypothetical protein. | Hypothetical protein. | 0.765 |
SLG_00910 | SLG_22500 | Hypothetical protein. | Putative signaling protein. | 0.554 |
SLG_00910 | SLG_29350 | Hypothetical protein. | Hypothetical protein. | 0.853 |
SLG_00910 | SLG_33580 | Hypothetical protein. | Putative signaling protein. | 0.569 |
SLG_00910 | SLG_36390 | Hypothetical protein. | Conserved hypothetical protein. | 0.843 |
SLG_03840 | SLG_00910 | Putative signaling protein. | Hypothetical protein. | 0.869 |
SLG_03840 | SLG_10080 | Putative signaling protein. | Conserved hypothetical membrane protein. | 0.833 |
SLG_03840 | SLG_10500 | Putative signaling protein. | Conserved hypothetical protein. | 0.811 |
SLG_03840 | SLG_11420 | Putative signaling protein. | Conserved hypothetical protein. | 0.875 |
SLG_03840 | SLG_12330 | Putative signaling protein. | Hypothetical protein. | 0.724 |
SLG_03840 | SLG_20360 | Putative signaling protein. | Hypothetical protein. | 0.896 |
SLG_03840 | SLG_22500 | Putative signaling protein. | Putative signaling protein. | 0.501 |
SLG_03840 | SLG_29350 | Putative signaling protein. | Hypothetical protein. | 0.733 |
SLG_03840 | SLG_33580 | Putative signaling protein. | Putative signaling protein. | 0.503 |
SLG_03840 | SLG_36390 | Putative signaling protein. | Conserved hypothetical protein. | 0.727 |
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