Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SLG_13250 | SLG_23650 | SLG_13250 | SLG_23650 | Putative hydrolase. | Putative M2 family peptidase. | 0.502 |
SLG_13250 | SLG_29840 | SLG_13250 | SLG_29840 | Putative hydrolase. | Peptidase M28 family protein. | 0.412 |
SLG_21780 | SLG_23650 | SLG_21780 | SLG_23650 | Conserved hypothetical protein. | Putative M2 family peptidase. | 0.458 |
SLG_23650 | SLG_13250 | SLG_23650 | SLG_13250 | Putative M2 family peptidase. | Putative hydrolase. | 0.502 |
SLG_23650 | SLG_21780 | SLG_23650 | SLG_21780 | Putative M2 family peptidase. | Conserved hypothetical protein. | 0.458 |
SLG_23650 | SLG_23660 | SLG_23650 | SLG_23660 | Putative M2 family peptidase. | Putative hydrolase. | 0.751 |
SLG_23650 | SLG_23670 | SLG_23650 | SLG_23670 | Putative M2 family peptidase. | MarR family transcriptional regulator. | 0.513 |
SLG_23650 | SLG_23680 | SLG_23650 | SLG_23680 | Putative M2 family peptidase. | Multidrug resistance protein A. | 0.450 |
SLG_23650 | SLG_23690 | SLG_23650 | SLG_23690 | Putative M2 family peptidase. | Multidrug resistance protein B; Belongs to the major facilitator superfamily. | 0.504 |
SLG_23650 | SLG_29840 | SLG_23650 | SLG_29840 | Putative M2 family peptidase. | Peptidase M28 family protein. | 0.504 |
SLG_23650 | SLG_30810 | SLG_23650 | SLG_30810 | Putative M2 family peptidase. | Putative M13 family peptidase. | 0.585 |
SLG_23650 | SLG_30860 | SLG_23650 | SLG_30860 | Putative M2 family peptidase. | Putative M28 family peptidase. | 0.631 |
SLG_23650 | purB | SLG_23650 | SLG_22980 | Putative M2 family peptidase. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.445 |
SLG_23660 | SLG_23650 | SLG_23660 | SLG_23650 | Putative hydrolase. | Putative M2 family peptidase. | 0.751 |
SLG_23660 | SLG_23670 | SLG_23660 | SLG_23670 | Putative hydrolase. | MarR family transcriptional regulator. | 0.673 |
SLG_23660 | SLG_23680 | SLG_23660 | SLG_23680 | Putative hydrolase. | Multidrug resistance protein A. | 0.553 |
SLG_23660 | SLG_23690 | SLG_23660 | SLG_23690 | Putative hydrolase. | Multidrug resistance protein B; Belongs to the major facilitator superfamily. | 0.601 |
SLG_23670 | SLG_23650 | SLG_23670 | SLG_23650 | MarR family transcriptional regulator. | Putative M2 family peptidase. | 0.513 |
SLG_23670 | SLG_23660 | SLG_23670 | SLG_23660 | MarR family transcriptional regulator. | Putative hydrolase. | 0.673 |
SLG_23670 | SLG_23680 | SLG_23670 | SLG_23680 | MarR family transcriptional regulator. | Multidrug resistance protein A. | 0.914 |
page 1 of 2