STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLG_38720Arylsulfate sulfotransferase-like protein. (88 aa)    
Predicted Functional Partners:
SLG_38730
acetoacetyl-CoA reductase.
       0.830
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
       0.765
SLG_38750
Isoquinoline 1-oxidoreductase beta subunit.
       0.686
SLG_38760
Hypothetical protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
    0.668
SLG_37160
Conserved hypothetical protein.
  
     0.586
SLG_23560
Hypothetical protein.
 
     0.575
SLG_11610
Hypothetical protein.
  
     0.555
SLG_00390
Hypothetical protein.
  
     0.546
SLG_37100
Cobalamin biosynthesis protein.
 
     0.532
SLG_07370
Conserved hypothetical protein.
  
     0.523
Your Current Organism:
Sphingobium sp. SYK6
NCBI taxonomy Id: 627192
Other names: S. sp. SYK-6, Sphingobium sp. SYK-6
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