STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bm1_23210Bm9596. (335 aa)    
Predicted Functional Partners:
Bm6883
Bm6883.
  
 0.767
Bm1_17220
Bm6398, isoform c.
  
 0.762
bma-mel-32
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.543
Bm1_08740
Bm1697.
   
 
 0.521
Bm1_41780
Bm5415.
  
 
 0.506
A0A5S6PLQ5
Bm3931, isoform d.
   
 
 0.489
Bm1_40665
Bm10931.
   
 
 0.484
Bm1_34990
Uncharacterized protein.
   
 
 0.483
Bm1_51685
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.482
Bm1_28330
Uncharacterized protein.
  
 
 0.482
Your Current Organism:
Brugia malayi
NCBI taxonomy Id: 6279
Other names: B. malayi, agent of lymphatic filariasis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.