STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5S6PDB3Uncharacterized protein. (531 aa)    
Predicted Functional Partners:
Bm1_13550
Bm8916.
   
 0.507
bma-dut-1
BMA-DUT-1.
    
 0.488
Bma-lin-53
BMA-LIN-53.
    
 0.433
Bm9404
Bm9404.
    
 0.432
Bm1_22955
Uncharacterized protein.
   
 0.428
Bm1_46945
BMA-XPF-1; BMA-XPF-1; ERCC4 domain containing protein; ERCC4 domain containing protein.
    
  0.408
Your Current Organism:
Brugia malayi
NCBI taxonomy Id: 6279
Other names: B. malayi, agent of lymphatic filariasis
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