STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azo2027Conserved hypothetical truncated transposase. Homology to Reut02001235 of Ralstonia metallidurans of 31% (gi|48772472|ref|ZP_00276814.1|(NBCI ENTREZ)). No domains predicted. No signal peptide. No TMHs; Conserved hypothetical protein. (59 aa)    
Predicted Functional Partners:
azo2028
Hypothetical protein predicted by Glimmer/Critica no homology of the entire protein to the data bank no domains predicted no signal peptide no TMHs.
       0.642
azo2029
Conserved hypothetical transposase. Homology to ebB8 of Azoarcus sp. EbN1 of 91% (gnl|keqq|eba:ebB8(KEGG)). Pfam: IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition. No signal peptide. Probable 1 TMHs; Conserved hypothetical protein.
       0.574
azo2030
Hypothetical truncated transposase. Homology to the N-terminus of ebA290 of Azoarcus sp. EbN1 of 92% (gnl|keqq|eba:ebA290(KEGG)). No domains predicted. No signal peptide. No TMHs.
       0.425
Your Current Organism:
Azoarcus sp. BH72
NCBI taxonomy Id: 62928
Other names: A. sp. BH72
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