STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDS82612.1Putative membrane protein. (775 aa)    
Predicted Functional Partners:
SDS82630.1
Hypothetical protein.
 
  
 0.974
SDS82663.1
Protein of unknown function.
       0.661
SDR84192.1
Hypothetical protein.
 
  
 0.577
kynA
Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.
 
     0.501
SDT02780.1
Hypothetical protein.
  
     0.470
SDS22453.1
Protein of unknown function; Manually curated.
  
     0.468
SDS73476.1
Putative peptidoglycan lipid II flippase.
  
     0.459
SDS33650.1
Methyltransferase domain-containing protein.
  
     0.458
SDS82562.1
Hypothetical protein.
       0.457
SDS10084.1
Hypothetical protein.
  
     0.436
Your Current Organism:
Microlunatus soli
NCBI taxonomy Id: 630515
Other names: CCM 7685, DSM 21800, M. soli, Microlunatus soli Kampfer et al. 2010, Microlunatus sp. CC-012602, strain CC-012602, strain CC-12602
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.