STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5EQJ4F-box domain containing protein. (260 aa)    
Predicted Functional Partners:
A0A2P5DRC4
DNA helicase, ATP-dependent.
    
 0.946
A0A2P5E1Z6
Replication factor A protein.
   
 0.836
A0A2P5G1A7
Replication factor A protein.
   
 0.836
A0A2P5EPP8
Uncharacterized protein.
    
 0.820
A0A2P5AV10
Coatomer beta subunit; Belongs to the PI3/PI4-kinase family.
    
 0.812
A0A2P5E6W3
DNA helicase; Belongs to the MCM family.
   
 0.729
A0A2P5BJZ5
RecQ mediated genome instability protein, N-terminal.
    
 0.701
A0A2P5CP01
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.693
A0A2P5EPU5
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.693
A0A2P5DVT7
DNA helicase; Belongs to the MCM family.
   
 0.690
Your Current Organism:
Trema orientale
NCBI taxonomy Id: 63057
Other names: Celtis orientalis, Sponia africana, T. orientale, Trema africana, Trema africanum, Trema orientalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.