STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFJ46252.1Hypothetical protein. (165 aa)    
Predicted Functional Partners:
AFJ46253.1
Hypothetical protein; CblD family.
 
 
 0.998
AFJ46254.1
Hypothetical protein.
 
  
 0.978
AFJ46255.1
Putative membrane protein; Catalytic region.
 
  
 0.964
AFJ46257.1
Hypothetical protein.
 
 
 0.952
AFJ46259.1
VGR-related protein.
 
  
 0.946
AFJ46285.1
ImpA-related protein.
 
  
 0.938
AFJ46286.1
Hypothetical protein; VC_A0110 family.
 
  
 0.925
AFJ46287.1
Hypothetical protein; RpiR family.
 
  
 0.925
AFJ46289.1
VGR-related protein.
 
  
 0.922
AFJ48669.1
VGR-related protein.
 
  
 0.922
Your Current Organism:
Shimwellia blattae
NCBI taxonomy Id: 630626
Other names: Escherichia blattae CIP 104942, Escherichia blattae DSM 4481, Escherichia blattae NBRC 105725, S. blattae DSM 4481 = NBRC 105725, Shimwellia blattae CIP 104942, Shimwellia blattae DSM 4481, Shimwellia blattae DSM 4481 = NBRC 105725, Shimwellia blattae NBRC 105725, Shimwellia blattae NBRC 105725 = DSM 4481
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.