STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001189235_04353Unannotated protein. (441 aa)    
Predicted Functional Partners:
GCA_001189235_01014
Unannotated protein.
   
 0.788
GCA_001189235_06671
Unannotated protein.
  
  
  0.786
GCA_001189235_05983
Unannotated protein.
  
  
 
0.714
GCA_001189235_01956
Unannotated protein.
     
 0.713
GCA_001189235_03457
Unannotated protein.
  
  
 
0.711
GCA_001189235_05436
Unannotated protein.
  
  
 
0.703
GCA_001189235_07312
Unannotated protein.
 
  0.687
GCA_001189235_05404
Unannotated protein.
  
  
 
0.668
GCA_001189235_03456
Unannotated protein.
  
  
  0.666
GCA_001189235_07291
Unannotated protein.
  
 
  0.659
Your Current Organism:
Bradyrhizobium embrapense
NCBI taxonomy Id: 630921
Other names: B. embrapense, BR 2212, Bradyrhizobium embrapense Delamuta et al. 2015, Bradyrhizobium sp. SEMIA 6208, CIAT 2372, LMG 2987, LMG:2987, SEMIA 6208, U674, strain CNPSo 2833
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.