STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N177_1498Glutamate synthase [NADPH] large chain; Belongs to the glutamate synthase family. (446 aa)    
Predicted Functional Partners:
N177_2699
Glutamate synthase [NADPH] small chain.
 
 0.999
N177_1497
Glutamate synthase [NADPH] putative GlxC chain.
  0.998
N177_2700
Glutamate synthase [NADPH] large chain.
  
0.995
N177_1496
Glutamine amidotransferase protein GlxB.
 
 0.991
N177_1499
Glutamine synthetase type I.
 
 
 0.919
N177_1512
Aminomethyltransferase; Belongs to the GcvT family.
 
  
 0.907
N177_1495
Transcriptional regulator, MerR family.
 
     0.890
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
 0.882
N177_2331
Sarcosine oxidase delta subunit.
 
  
  0.866
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 0.822
Your Current Organism:
Lutibaculum baratangense
NCBI taxonomy Id: 631454
Other names: L. baratangense AMV1, Lutibaculum baratangense AMV1, Phyllobacteriaceae bacterium AMV1
Server load: low (18%) [HD]