STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
N177_3279Hypothetical protein. (231 aa)    
Predicted Functional Partners:
N177_3181
Ubiquinone biosynthesis monooxygenase UbiB.
  
     0.771
N177_3281
Hypothetical protein.
 
     0.717
N177_3278
Protein secretion chaperonin CsaA.
       0.707
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
       0.659
N177_0810
Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
  
     0.563
N177_0686
Protein of unknown function DUF1022.
  
     0.562
N177_2572
Hypothetical protein.
  
     0.543
N177_1224
Glycosyltransferase.
  
     0.531
N177_0873
Methyl-accepting chemotaxis protein.
  
     0.513
N177_2496
SAM-dependent methyltransferase 2, in cluster with Hydroxyacylglutathione hydrolase.
  
 
   0.496
Your Current Organism:
Lutibaculum baratangense
NCBI taxonomy Id: 631454
Other names: L. baratangense AMV1, Lutibaculum baratangense AMV1, Phyllobacteriaceae bacterium AMV1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.