STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ41435.1TIGRFAM: ABC-type bacteriocin transporter; PFAM: ABC transporter related; peptidase C39 bacteriocin processing; ABC transporter transmembrane region; KEGG: ate:Athe_0327 ABC-type bacteriocin transporter; SMART: AAA ATPase. (732 aa)    
Predicted Functional Partners:
ADQ39850.1
TIGRFAM: ABC-type bacteriocin transporter; PFAM: ABC transporter related; peptidase C39 bacteriocin processing; ABC transporter transmembrane region; KEGG: ate:Athe_0327 ABC-type bacteriocin transporter; SMART: AAA ATPase.
  
  
 
0.901
ADQ39851.1
PFAM: secretion protein HlyD family protein; KEGG: ate:Athe_0252 secretion protein HlyD family protein.
 
 
 0.887
ADQ41827.1
KEGG: csc:Csac_0655 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
 
 
  
0.611
ADQ41048.1
KEGG: ate:Athe_1525 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
 
 
  
0.592
ADQ41049.1
KEGG: ate:Athe_1526 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
 
 
  
0.578
ADQ39637.1
KEGG: csc:Csac_0521 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
 
 
  
0.577
ADQ41329.1
KEGG: ate:Athe_0466 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
 
 
  
0.574
ADQ39638.1
KEGG: csc:Csac_0522 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
 
 
  
0.571
ADQ39602.1
PFAM: secretion protein HlyD family protein; KEGG: ate:Athe_1576 hypothetical protein.
  
 
 0.549
ADQ41026.1
PFAM: secretion protein HlyD family protein; KEGG: ate:Athe_1515 secretion protein HlyD family protein.
  
 
 0.549
Your Current Organism:
Caldicellulosiruptor kristjanssonii
NCBI taxonomy Id: 632335
Other names: C. kristjanssonii I77R1B, Caldicellulosiruptor kristjanssonii DSM 12137, Caldicellulosiruptor kristjanssonii I77R1B, Caldicellulosiruptor kristjanssonii str. I77R1B, Caldicellulosiruptor kristjanssonii strain I77R1B
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