STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ41898.1KEGG: ate:Athe_0077 S-layer domain protein; PFAM: transglutaminase domain-containing protein; S-layer domain-containing protein; SMART: transglutaminase domain-containing protein. (1779 aa)    
Predicted Functional Partners:
ADQ41463.1
PFAM: S-layer domain-containing protein; glycoside hydrolase starch-binding; KEGG: ate:Athe_0609 pullulanase, type I.
  
     0.749
ADQ40480.1
KEGG: ate:Athe_0980 cell divisionFtsK/SpoIIIE; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: AAA ATPase.
    
 
 0.663
ADQ41479.1
PFAM: glycoside hydrolase family 5; S-layer domain-containing protein; KEGG: ate:Athe_0594 cellulase.
  
 
   0.651
ADQ41127.1
KEGG: ate:Athe_1622 hypothetical protein.
    
   0.635
ADQ41330.1
Pectate lyase; KEGG: ate:Athe_1854 pectate lyase; PFAM: Pectate lyase.
 
 
 0.515
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.496
pyrG
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
       0.440
ADQ41900.1
KEGG: ate:Athe_0064 Appr-1-p processing domain protein; PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein.
 
     0.436
Your Current Organism:
Caldicellulosiruptor kristjanssonii
NCBI taxonomy Id: 632335
Other names: C. kristjanssonii I77R1B, Caldicellulosiruptor kristjanssonii DSM 12137, Caldicellulosiruptor kristjanssonii I77R1B, Caldicellulosiruptor kristjanssonii str. I77R1B, Caldicellulosiruptor kristjanssonii strain I77R1B
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