Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ROP_06700 | ROP_06710 | ROP_06700 | ROP_06710 | Hypothetical protein. | Putative hydrolase. | 0.946 |
ROP_06700 | ROP_06720 | ROP_06700 | ROP_06720 | Hypothetical protein. | Hypothetical protein. | 0.946 |
ROP_06700 | ppnK | ROP_06700 | ROP_06680 | Hypothetical protein. | Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.952 |
ROP_06700 | recN | ROP_06700 | ROP_06670 | Hypothetical protein. | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | 0.950 |
ROP_06700 | tlyA | ROP_06700 | ROP_06690 | Hypothetical protein. | Putative hemolysin. | 0.911 |
ROP_06710 | ROP_06700 | ROP_06710 | ROP_06700 | Putative hydrolase. | Hypothetical protein. | 0.946 |
ROP_06710 | ROP_06720 | ROP_06710 | ROP_06720 | Putative hydrolase. | Hypothetical protein. | 0.993 |
ROP_06710 | ppnK | ROP_06710 | ROP_06680 | Putative hydrolase. | Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.946 |
ROP_06710 | recN | ROP_06710 | ROP_06670 | Putative hydrolase. | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | 0.944 |
ROP_06710 | tlyA | ROP_06710 | ROP_06690 | Putative hydrolase. | Putative hemolysin. | 0.899 |
ROP_06720 | ROP_06700 | ROP_06720 | ROP_06700 | Hypothetical protein. | Hypothetical protein. | 0.946 |
ROP_06720 | ROP_06710 | ROP_06720 | ROP_06710 | Hypothetical protein. | Putative hydrolase. | 0.993 |
ROP_06720 | ppnK | ROP_06720 | ROP_06680 | Hypothetical protein. | Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.958 |
ROP_06720 | recN | ROP_06720 | ROP_06670 | Hypothetical protein. | DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. | 0.944 |
ROP_06720 | tlyA | ROP_06720 | ROP_06690 | Hypothetical protein. | Putative hemolysin. | 0.905 |
ROP_15930 | nadD | ROP_15930 | ROP_10190 | Hypothetical protein. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.959 |
ROP_15930 | nadE | ROP_15930 | ROP_64860 | Hypothetical protein. | NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. | 0.963 |
ROP_15930 | pntAA | ROP_15930 | ROP_12860 | Hypothetical protein. | Nicotinamide nucleotide transhydrogenase alpha subunit 1 PntAA; Protein synonym:proton-translocating NAD(P) transhydrogenase. | 0.900 |
ROP_15930 | pntAB | ROP_15930 | ROP_12850 | Hypothetical protein. | Nicotinamide nucleotide transhydrogenase alpha subunit 2 PntAB; Protein synonym:proton-translocating NAD(P) transhydrogenase. | 0.900 |
ROP_15930 | ppnK | ROP_15930 | ROP_06680 | Hypothetical protein. | Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.947 |
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