Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ROP_17440 | ROP_17460 | ROP_17440 | ROP_17460 | Hypothetical protein. | Putative non-heme haloperoxidase. | 0.722 |
ROP_17440 | ROP_17480 | ROP_17440 | ROP_17480 | Hypothetical protein. | Putative hydrolase. | 0.553 |
ROP_17440 | mshA | ROP_17440 | ROP_17450 | Hypothetical protein. | Putative glycosyltransferase MshA; Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2- deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway. | 0.910 |
ROP_17460 | ROP_17440 | ROP_17460 | ROP_17440 | Putative non-heme haloperoxidase. | Hypothetical protein. | 0.722 |
ROP_17460 | ROP_17480 | ROP_17460 | ROP_17480 | Putative non-heme haloperoxidase. | Putative hydrolase. | 0.846 |
ROP_17460 | mshA | ROP_17460 | ROP_17450 | Putative non-heme haloperoxidase. | Putative glycosyltransferase MshA; Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2- deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway. | 0.739 |
ROP_17480 | ROP_17440 | ROP_17480 | ROP_17440 | Putative hydrolase. | Hypothetical protein. | 0.553 |
ROP_17480 | ROP_17460 | ROP_17480 | ROP_17460 | Putative hydrolase. | Putative non-heme haloperoxidase. | 0.846 |
ROP_17480 | mca | ROP_17480 | ROP_59140 | Putative hydrolase. | Mycothiol S-conjugate amidase Mca; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily. | 0.408 |
ROP_17480 | mshA | ROP_17480 | ROP_17450 | Putative hydrolase. | Putative glycosyltransferase MshA; Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2- deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway. | 0.790 |
ROP_17480 | mshC | ROP_17480 | ROP_06130 | Putative hydrolase. | cysteine--1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.526 |
ROP_17480 | mshD | ROP_17480 | ROP_49430 | Putative hydrolase. | Acetyltransferase MshD; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.786 |
ROP_64420 | mca | ROP_64420 | ROP_59140 | Glutaredoxin family protein. | Mycothiol S-conjugate amidase Mca; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily. | 0.719 |
ROP_64420 | mshA | ROP_64420 | ROP_17450 | Glutaredoxin family protein. | Putative glycosyltransferase MshA; Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2- deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway. | 0.708 |
ROP_64420 | mshB | ROP_64420 | ROP_59960 | Glutaredoxin family protein. | N-acetyl-1-D-myo-Inosityl-2-amino-2-deoxy-alpha- D-glucopyranoside deacetylase MshB; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | 0.584 |
ROP_64420 | mshC | ROP_64420 | ROP_06130 | Glutaredoxin family protein. | cysteine--1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.554 |
ROP_64420 | mshD | ROP_64420 | ROP_49430 | Glutaredoxin family protein. | Acetyltransferase MshD; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.556 |
egtE | mshA | ROP_57680 | ROP_17450 | Putative aminotransferase; Probably catalyzes the conversion of hercynylcysteine sulfoxide to ergothioneine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. EgtE subfamily. | Putative glycosyltransferase MshA; Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2- deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway. | 0.711 |
ino1 | mshA | ROP_32400 | ROP_17450 | Myo-inositol-1-phosphate synthase. | Putative glycosyltransferase MshA; Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2- deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway. | 0.768 |
mca | ROP_17480 | ROP_59140 | ROP_17480 | Mycothiol S-conjugate amidase Mca; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily. | Putative hydrolase. | 0.408 |
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