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macA_1 protein (Yersinia pseudotuberculosis) - STRING interaction network
"macA_1" - UPF0194 membrane protein ERS008480_00346 in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
macA_1UPF0194 membrane protein ERS008480_00346; RND_mfp- efflux transporter, RND family, MFP subunit (328 aa)    
Predicted Functional Partners:
ybhS
annotation not available (391 aa)
 
  0.989
ybhR
annotation not available (368 aa)
 
  0.989
ybhF
ccmA- heme ABC exporter, ATP-binding protein CcmA (580 aa)
 
  0.986
kstR2
annotation not available (236 aa)
 
        0.861
oprM
outer_NodT- efflux transporter, outer membrane factor (OMF) lipo, NodT family protein (468 aa)
 
 
  0.662
macB
Macrolide export ATP-binding/permease protein MacB; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides (649 aa)
 
 
  0.602
acrB_1
2A0602- RND transporter, hydrophobe/amphiphile efflux-1 family protein (1041 aa)
 
 
  0.565
tolC
annotation not available (464 aa)
   
 
  0.562
acrB
annotation not available (1050 aa)
 
 
  0.562
acrD
2A0602- RND transporter, hydrophobe/amphiphile efflux-1 family protein (1043 aa)
 
 
  0.553
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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