STRINGSTRING
ybhS protein (Yersinia pseudotuberculosis) - STRING interaction network
"ybhS" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ybhSannotation not available (391 aa)    
Predicted Functional Partners:
ybhF
ccmA- heme ABC exporter, ATP-binding protein CcmA (580 aa)
 
  0.994
macA_1
UPF0194 membrane protein ERS008480_00346; RND_mfp- efflux transporter, RND family, MFP subunit (328 aa)
 
  0.989
ybhR
annotation not available (368 aa)
 
   
0.946
kstR2
annotation not available (236 aa)
 
        0.836
queF
NADPH-dependent 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) (281 aa)
   
   
  0.438
yadG
ABC transporter ATP-binding protein (308 aa)
 
 
  0.425
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
Server load: low (12%) [HD]