STRINGSTRING
galR protein (Yersinia pseudotuberculosis) - STRING interaction network
"galR" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galRannotation not available (338 aa)    
Predicted Functional Partners:
gltB
annotation not available (1485 aa)
       
 
  0.729
galT
galT_1- galactose-1-phosphate uridylyltransferase (350 aa)
 
     
  0.707
galE
UDP-galactose-4-epimerase; galE- UDP-glucose 4-epimerase GalE (338 aa)
     
 
  0.644
DJ40_103
Uncharacterized protein (156 aa)
              0.643
mglB
annotation not available (330 aa)
   
 
  0.642
galM
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer (356 aa)
         
  0.629
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P); Belongs to the GHMP kinase family. GalK subfamily (383 aa)
 
     
  0.605
nhaC
antiport_nhaC- Na+/H+ antiporter NhaC (484 aa)
 
          0.602
celB
Permease IIC component; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active - transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane (453 aa)
           
  0.596
glpQ
annotation not available (371 aa)
           
  0.594
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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