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DJ40_1093 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_1093" - cyd_oper_ybgE: cyd operon protein YbgE in Yersinia pseudotuberculosis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_1093cyd_oper_ybgE- cyd operon protein YbgE (99 aa)    
Predicted Functional Partners:
cydB
cydB- cytochrome d ubiquinol oxidase, subunit II (379 aa)
   
        0.858
cydA
annotation not available (522 aa)
   
        0.760
yciN
annotation not available (83 aa)
   
          0.666
ybgC
thio_ybgC- tol-pal system-associated acyl-CoA thioesterase (133 aa)
         
  0.665
tolQ
tolQ- protein TolQ (228 aa)
         
  0.665
tolR
tolR- protein TolR (142 aa)
         
  0.646
yfbU
UPF0304 protein ERS008480_02202; Belongs to the UPF0304 family (164 aa)
   
          0.639
yiiS
DUF406 domain-containing protein (98 aa)
   
          0.622
DJ40_311
Protein of uncharacterised function (DUF2583) (90 aa)
   
          0.622
DJ40_926
annotation not available (114 aa)
   
          0.621
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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