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DJ40_1128 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_1128" - Beta subunit/140 kD subunit in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_1128Beta subunit/140 kD subunit (184 aa)    
Predicted Functional Partners:
DJ40_1129
Conserved hypothetical protein (193 aa)
            0.954
DJ40_1118
Bacterial shufflon , N-terminal constant region family protein (438 aa)
   
          0.765
DJ40_1125
annotation not available (465 aa)
   
          0.665
DJ40_1236
annotation not available (277 aa)
   
          0.544
DJ40_3208
annotation not available (187 aa)
   
          0.540
DJ40_3209
annotation not available (97 aa)
   
          0.523
ykfI
annotation not available (118 aa)
   
          0.499
DJ40_3136
annotation not available (291 aa)
   
          0.488
yfjZ
annotation not available (110 aa)
   
          0.464
yeeV
annotation not available (122 aa)
   
          0.449
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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