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DJ40_1137 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_1137" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_1137annotation not available (83 aa)    
Predicted Functional Partners:
adrA
PAS/PAC domain-containing protein; GGDEF- diguanylate cyclase domain protein (693 aa)
   
          0.579
DJ40_4177
Uncharacterized protein (64 aa)
   
          0.540
DJ40_87
annotation not available (798 aa)
 
          0.518
bvgS
annotation not available (1330 aa)
   
          0.503
DJ40_2048
Pili and flagellar-assembly chaperone, PapD N-terminal domain protein (247 aa)
   
          0.494
pgaD
Hemin storage system protein; PGA_PgaD- poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD (155 aa)
   
          0.448
DJ40_1477
annotation not available (617 aa)
   
          0.415
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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