STRINGSTRING
DJ40_1140 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_1140" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_1140annotation not available (95 aa)    
Predicted Functional Partners:
fldA
Flavodoxin; Low-potential electron donor to a number of redox enzymes (175 aa)
 
   
  0.706
ilvM
annotation not available (85 aa)
   
          0.695
ybfF
annotation not available (255 aa)
              0.562
tus
DNA replication terminus site-binding protein; Trans-acting protein required for termination of DNA replication. Binds to DNA replication terminator sequences (terA to terF) to prevent the passage of replication forks. The termination efficiency will be affected by the affinity of this protein for the terminator sequence (311 aa)
   
     
  0.525
DJ40_1139
annotation not available (35 aa)
              0.487
pepQ
Xaa-Pro dipeptidase; Splits dipeptides with a prolyl residue in the C- terminal position (443 aa)
   
          0.468
DJ40_1655
UPF0231 protein ERS008480_02285; Belongs to the UPF0231 family (119 aa)
   
          0.442
hda
DnaA regulatory inactivator Hda; Mediates the interaction of DNA replication inititator protein DnaA with DNA polymerase subunit beta sliding clamp (dnaN). Stimulates hydrolysis of ATP-DnaA to ADP-DnaA, rendering DnaA inactive for reinititation, a process called regulatory inhibition of DnaA or RIDA (235 aa)
   
        0.437
DJ40_1403
Lipoprotein YajG (192 aa)
   
        0.429
DJ40_817
Uncharacterized protein (588 aa)
   
          0.418
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
Server load: low (13%) [HD]