STRINGSTRING
mlc_3 protein (Yersinia pseudotuberculosis) - STRING interaction network
"mlc_3" - annotation not available in Yersinia pseudotuberculosis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mlc_3annotation not available (408 aa)    
Predicted Functional Partners:
nagB
Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion (266 aa)
 
 
  0.927
nagA_3
nagA- N-acetylglucosamine-6-phosphate deacetylase; Belongs to the metallo-dependent hydrolases superfamily. NagA family (381 aa)
 
     
  0.917
nagE
PTS-II-BC-nag- PTS system, N-acetylglucosamine-specific IIBC component (677 aa)
     
 
  0.852
ptsG
annotation not available (477 aa)
     
 
  0.687
treP
PTS-IIBC-Tre- PTS system, trehalose-specific IIBC component (471 aa)
     
 
  0.687
cadA
ATPase-IB2_Cd- cadmium-translocating P-type ATPase (782 aa)
 
     
  0.684
nagD
UMP phosphatase; HAD-SF-IA-v1- HAD hydrolase, IA, variant 1 family protein (250 aa)
   
   
  0.677
DJ40_1822
PTS_I_fam- phosphoenolpyruvate-protein phosphotransferase (858 aa)
     
 
  0.665
mntH
Divalent metal cation transporter MntH; H(+)-stimulated, divalent metal cation uptake system (409 aa)
         
  0.608
feoA
annotation not available (75 aa)
         
  0.591
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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