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idhA protein (Yersinia pseudotuberculosis) - STRING interaction network
"idhA" - Oxidoreductase, NAD-binding in Yersinia pseudotuberculosis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
idhAOxidoreductase, NAD-binding; Oxidoreductase family, C-terminal alpha/beta domain protein (328 aa)    
Predicted Functional Partners:
iolE
annotation not available (356 aa)
 
 
  0.991
ilvB1
annotation not available (641 aa)
 
     
  0.911
suhB
annotation not available (267 aa)
       
  0.904
iolC
annotation not available (656 aa)
 
   
  0.900
iolB
annotation not available (271 aa)
 
     
  0.895
murR_2
annotation not available (284 aa)
 
        0.819
rbsB_4
annotation not available (309 aa)
 
          0.729
mmsA
MMSDH- methylmalonate-semialdehyde dehydrogenase (508 aa)
   
  0.715
gfo
Oxidoreductase family, C-terminal alpha/beta domain protein (377 aa)
 
       
0.627
rbsC_8
annotation not available (342 aa)
 
          0.542
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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